Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq472 199 3e-46 >seq472 Length=1464009 Score = 199 bits (220), Expect = 3e-46 Identities = 768/1195 (64%), Gaps = 25/1195 (2%) Strand=Plus/Minus Query 35663 AAGCCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGAAT 35722 ||||| |||| ||||||||| || | |||||| ||||| || || |||||||| ||||| Sbjct 408529 AAGCCCATATTCATAGCGTTCAGGATATCGCCATTGTCAGCGTCTATTTCCCAAGCGAAC 408470 Query 35723 AATCCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCGATCTTTCGCTG 35782 | ||| || || || | |||||||| || || | | || |||||| || Sbjct 408469 AGTCCACCAAGCTTATTGTTCCTCACGTATTTCCCCTTCTCAATAACTGATCTTGCGTCA 408410 Query 35783 TCATACGATATTAAGTCGCCAGAGGCGCGGTCGAATACGTACGCAGCCTTGGCCACGTCG 35842 ||||| | | | ||||| | | | | | ||||| | ||| | || || | Sbjct 408409 TCATAAGTCACCAGATCGCCGGTTGTAGGATTCCACACGTATGGAGCTTGAGCAACTTTA 408350 Query 35843 TCGAATGCGTA--------TTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCGA 35894 ||| | ||| ||| | | | || || || | |||| || ||||| | Sbjct 408349 TCGTAAAAGTACTGCCATGTTCCTGAAGTGA--TGCCATTCACGATCTCCCTATAGTCCA 408292 Query 35895 CCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTGT 35954 |||| |||| | ||| || || | | || || || || ||| |||| || ||| Sbjct 408291 CCACACCGTCCTGCCAAGTTCCTTTAACTGGACCATTAGCAACTCCAGTGAAGGGTATGT 408232 Query 35955 CACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACGA 36014 | |||||||| ||| || || |||||||| || |||||||| || || || | || | Sbjct 408231 CGTCGTTGTAGTCGTGAACTCCAGTCCAACCACGTCCGTACATAGCAACACCGACAACCA 408172 Query 36015 GtttttttGGATTCACTCGTTGCGCGAGCAA--AGCGTCCACGGCCACGTTGGCGGTGTA 36072 | ||||| || | || | ||| | |||| | | || | | || || |||||| Sbjct 408171 GCTTTTTGGGCTGGACACCTTGGGTCAGCAGGTACCTGATACCG--AAGTCGGTGGTGTA 408114 Query 36073 CGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTATT 36132 | ||| ||||| |||| | | | | || || || ||||| || || ||| | || Sbjct 408113 AGTTTCCTTAGGACTCCAAGATGGAGCATATAGAGCAGTCTGGTGTCCCAGAGTGTCGTT 408054 Query 36133 AGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGC 36192 |||||| || || ||||| || |||||||| ||||| || | || | || | || || Sbjct 408053 AGACCAGGCACCCTTGAAGTCGTAACTCATAACGAAGATATGGTCCATGTATTTCTGGGC 407994 Query 36193 TCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTC 36252 | | ||| || || | ||||||||| || ||||| || || | ||| | || Sbjct 407993 TTCCTTGTAGTTCACGACTTGGATCTTGTCCCAACCGGCGCTGATGGCAGAGGTCAACTC 407934 Query 36253 TAAAGTACGATTCGTTTGTATTTGAACTTGATCGAGCATGGCGCGCAATTCGCCCAATAA 36312 |||| | | || | | | ||| | ||| || ||||| || | Sbjct 407933 GTAAGTTCTACCAGTCTCAGCCGCCAGCTCATCCAACATTTGACGTAATTCCTTCATGA- 407875 Query 36313 AGCGATATACGTGTTATTGTC-GCGTTCCACATCGCCAACGTTTGGATTGGCGCCTTTGC 36371 | | |||| | | || | || | || | | || || |||||||||| Sbjct 407874 ---GCTGAACGTATACATCTCCGTCTTTAGGACTACCGAGATCAGGGTTAGCGCCTTTGC 407818 Query 36372 CGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACAAATT 36431 | || || || ||||||||||| |||| || ||||| || ||||| || | || | Sbjct 407817 CACCTGGGAACTCCCAATCAATGTCGACACCATCGAAGAACTTCCAAGTTTGGAGGAAGT 407758 Query 36432 CACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCATCG-TGCATATGATAGAAGGGA 36490 | |||||| | || ||| | ||| | ||| || | | || |||||||| Sbjct 407757 CTTTCACGGAGGCAACGAAACGATCACGCTTGGTTTTGTCGGTGAAGAAGA-AGAAGGGA 407699 Query 36491 TCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTGGGATTGGCCAATTTT 36550 |||| || |||||| || || ||||| | || || |||| | ||| || ||| Sbjct 407698 TCGGCCAATGTCCAGCCACCAATTGAAGGTAAGACCTTTAAGCCAGTATTCGCTTGTTTC 407639 Query 36551 G-CTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATG-CGCTAACGCCTG 36608 |||| || | || || || || ||||||||||| |||||||| | || ||| ||| Sbjct 407638 AACTGC-ATCAGCTGCCCGAAGTTACCTTTGTAGGGCTCGTTCCAGGACGATAATCCCT- 407581 Query 36609 TTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATTGTCCCTGC 36668 |||| ||||| || || |||||||| |||||||| || ||||| || || | || | || Sbjct 407580 TTTGAGGTTTCTGCAGGGCCGCCCAGGGATCGTGGATAGAAACCTTGAAGTCTTCACGGC 407521 Query 36669 CAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACTGTCGTTTA 36728 | ||| || | ||| | |||| |||||| ||| || ||| |||||||| || | Sbjct 407520 CGCTGCATGAACGTTGTAGTGCTTGAAAACTGCCCTCAATTTCTTTCAAACTGTCATTGA 407461 Query 36729 TACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTGCGAAAGGTTCGGCGTGG 36788 | || ||||| || |||||||| || || ||||| | | || | |||||||| | Sbjct 407460 TGCCATCACCACCACAAATCGGAATGAAGCCGTAGAGCAAATGAGTCAGGTTCGGAACCG 407401 Query 36789 GCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATAGGC 36843 | || |||||| || || || | || || ||||||||||| || || || Sbjct 407400 GAACGCGGTCCACAGGGAACTTTCTAGGATACACACCCCATTCGACGAAGTAAGC 407346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418082422148960