Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq483 100 3e-16 >seq483 Length=1310704 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 ||||| ||||| ||||| | | |||||||||||| || | |||||||| |||||||| Sbjct 166374 ATGTAGGTATCTATAAGCAGGGAATACATTTCAGAATGAACATTTTCCATGGCTATCTGG 166315 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || ||||| || ||||| || || | ||| ||||| ||||||| || |||| Sbjct 166314 AAGCCATAGAAACATCTTGCCTCAGTGACTTGAACTTCTTGTGAAAATCTCTCAACCAAG 166255 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14299 |||||||| || || ||||| ||| ||||| || || Sbjct 166254 TTTTCATTTACAATGCCATCTGAAGCCGCAAAGAAAGC 166217 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 13698 AGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13757 ||||||||||| |||| |||||| || || |||||||||| || || |||||||| | Sbjct 173977 AGTAATCTATCTGCAACAAACTCTATGTACTGAGACATTAGTTCGCAGTTCATACCGAGC 173918 Query 13758 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGAC-ACAGCCTCTTTTAT 13816 ||| ||||||| | || || | ||| |||| ||| || ||| || || |||||||| Sbjct 173917 AGTCTTACAGGGAGCGCATCTGTGAGAAACTCTTGTTCAAT-GACTACTGCATCTTTTAT 173859 Query 13817 AATA 13820 |||| Sbjct 173858 AATA 173855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479467369774200