Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq483 107 2e-18 >seq483 Length=1310704 Score = 107 bits (118), Expect = 2e-18 Identities = 121/160 (76%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 ||||| ||||| ||||| | | |||||||||||| || | ||||| || |||||||| Sbjct 166374 ATGTAGGTATCTATAAGCAGGGAATACATTTCAGAATGAACATTTTCCATGGCTATCTGG 166315 Query 13990 AAACCATAAAAACATCTAGCTTC--TGACCATTGTACCTCCGAGTAAAATCTTTCTGCCA 14047 || ||||| |||||||| || || |||| ||| || || ||||||| || ||| Sbjct 166314 AAGCCATAGAAACATCTTGCCTCAGTGAC--TTGAACTTCTTGTGAAAATCTCTCAACCA 166257 Query 14048 AGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087 |||||||||| ||||| ||||| ||| ||||| || || Sbjct 166256 AGTTTTCATTTACAATGCCATCTGAAGCCGCAAAGAAAGC 166217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478328788687320