Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq483 93.3 4e-14 >seq483 Length=1310704 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/163 (73%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 13202 AATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCC 13261 ||||| || ||||||||||| || || ||||| | ||| || || | |||||| || Sbjct 173463 AATGTAAGTCCCGGCATAAGGCCCCGCTTTTTGAGCCAGAAGATGGAAGCAAAACTGCCT 173404 Query 13262 GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTT 13321 || ||||| |||||||| || |||||||| || | | |||||||||| | || | | Sbjct 173403 GAGAAAAAGATTCCTTCTACAGCTGCAAAGGCAACAATCCTTTCACCAAATGTTGCAGTC 173344 Query 13322 TTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTT-TTGTTTA 13363 || || | ||||||| | ||||| | |||||| || |||| Sbjct 173343 TTGCTTGCAATCCACTGTAGAGCCCAATCTGCTTTCTTCTTTA 173301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430754106333126