Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq759 82.4 4e-11 >seq759 Length=6098939 Score = 82.4 bits (90), Expect = 4e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || || || || ||||| || ||||| || |||||||| | ||||| || |||||||| Sbjct 4411794 GGATTTTCAGTAGAGGGACAGGAAAACATTCAAGAAATACTTTCGAAGCAGTTGTATTTG 4411735 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 |||||||| | ||| ||||| || | ||| || || |||| ||| | ||| | Sbjct 4411734 TGTCAATGCCTCGCGGCACTGATGCTCGTGAGAACCGGCGGCCATTTTGTGGTGAAACTA 4411675 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAAT 4081 || ||| | || |||| ||||| ||| || | || | ||||| |||| |||| || Sbjct 4411674 TTTGATGTCTTCACACGGTTTAGCATTGGCTTGATCTACATTATGTACAGATGTTTTGAT 4411615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276407108088889