Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_006638.1 Length=15230 Score E Sequences producing significant alignments: (Bits) Value seq421 201 1e-47 seq743 167 2e-37 >seq421 Length=3876397 Score = 201 bits (222), Expect = 1e-47 Identities = 125/133 (94%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 14363 TCCCTGATTAGAAAAAGAGATTTGGAAAGATTCGAAATAGTTCAAAGCGATTAAAAAAGA 14422 |||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||| Sbjct 114998 TCCCTGATTAGAAAAAGAGATTTGAAAAGATTCGAAATGGATCAAAGAAATTAAAAAAGA 115057 Query 14423 TTCAACTTGACAAATATATAGATATACATTTTGCATGGGTTGAATCGTTTTAAATCtttt 14482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct 115058 TTCAACTTGACAAATATATAGATATACATTTTGCATGGGTTGAATCTTTTTAAA-CCTTT 115116 Query 14483 tttttAATAAGGG 14495 ||||||||||||| Sbjct 115117 TTTTTAATAAGGG 115129 >seq743 Length=9954263 Score = 167 bits (184), Expect = 2e-37 Identities = 120/137 (88%), Gaps = 5/137 (4%) Strand=Plus/Plus Query 14363 TCCCTGATTAGAAAAAGAGATTTGGAAAGATTCGAAATAGTTCAAAGCGATTAAAAAAGA 14422 |||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||| Sbjct 1131197 TCCCTGATTAGAAAAAGAGATTTGAAAAGATTCGAAATGGCTCAAAGAAATTAAAAAAGA 1131256 Query 14423 TTCAACTTGACAAA----TATATAGATATACATTTTGCATGGGTTGAATCGTTTTAAATC 14478 |||||||| ||||| |||||||||||| ||||||||||| || ||| |||||||| Sbjct 1131257 TTCAACTTAACAAATGTGTATATAGATATATATTTTGCATGGATTCAATATTTTTAAAT- 1131315 Query 14479 tttttttttAATAAGGG 14495 |||||||||||||||| Sbjct 1131316 ATTTTTTTTAATAAGGG 1131332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48593167665717