Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq37370 141 1e-29 seq29842 141 1e-29 seq27053 141 1e-29 seq1075 141 1e-29 seq36482 136 6e-28 seq34869 136 6e-28 seq13498 136 6e-28 seq7339 136 6e-28 seq5863 120 5e-23 seq32716 113 7e-21 seq1631 111 2e-20 seq767 93.3 7e-15 seq36114 86.0 1e-12 seq14027 82.4 1e-11 seq6378 82.4 1e-11 >seq37370 Length=820 Score = 141 bits (156), Expect = 1e-29 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 642 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 583 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| ||| | ||| | || | |||||| Sbjct 582 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCGCGGCGTTCTCAAAGTGTTCCTC 523 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 522 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 463 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 462 GCTATGGATGTTGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 403 Query 16697 TAA 16699 ||| Sbjct 402 TAA 400 >seq29842 Length=699 Score = 141 bits (156), Expect = 1e-29 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 321 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 262 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| ||| | ||| | || | |||||| Sbjct 261 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCGCGGCGTTCTCAAAGTGTTCCTC 202 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 201 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 142 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 141 GCTATGGATGTTGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 82 Query 16697 TAA 16699 ||| Sbjct 81 TAA 79 >seq27053 Length=678 Score = 141 bits (156), Expect = 1e-29 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 416 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 475 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| ||| | ||| | || | |||||| Sbjct 476 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCGCGGCGTTCTCAAAGTGTTCCTC 535 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 536 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 595 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 596 GCTATGGATGTTGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 655 Query 16697 TAA 16699 ||| Sbjct 656 TAA 658 >seq1075 Length=19690 Score = 141 bits (156), Expect = 1e-29 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 13812 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 13753 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| ||| | ||| | || | |||||| Sbjct 13752 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCGCGGCGTTCTCAAAGTGTTCCTC 13693 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 13692 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 13633 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 13632 GCTATGGATGTTGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 13573 Query 16697 TAA 16699 ||| Sbjct 13572 TAA 13570 >seq36482 Length=792 Score = 136 bits (150), Expect = 6e-28 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 543 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 484 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| || | ||| | || | |||||| Sbjct 483 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACCCGCGGCGTTCTCAAAGTGTTCCTC 424 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 423 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 364 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 363 GCTATGGATGTTGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 304 Query 16697 TAA 16699 ||| Sbjct 303 TAA 301 >seq34869 Length=757 Score = 136 bits (150), Expect = 6e-28 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 356 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 297 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| || | ||| | || | |||||| Sbjct 296 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACCCGCGGCGTTCTCAAAGTGTTCCTC 237 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 236 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 177 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 176 GCTATGGATGTTGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 117 Query 16697 TAA 16699 ||| Sbjct 116 TAA 114 >seq13498 Length=592 Score = 136 bits (150), Expect = 6e-28 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 279 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 220 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| || | ||| | || | |||||| Sbjct 219 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACCCGCGGCGTTCTCAAAGTGTTCCTC 160 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 159 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 100 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 99 GCTATGGATGTTGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 40 Query 16697 TAA 16699 ||| Sbjct 39 TAA 37 >seq7339 Length=538 Score = 136 bits (150), Expect = 6e-28 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| |||||| | |||||| Sbjct 212 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTGGGCTCGCAGAGGTGGA 271 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| ||| | ||| | || | |||||| Sbjct 272 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCGCGGCGTTCTCAAAGTGTTCCTC 331 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 332 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 391 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || || || ||||||| ||||| || | | || ||||| || || Sbjct 392 GCTATGGATGTGGTGTACGCTCTGAAACGCCAAGGTCGCACCCTGTACGGTTTCGGCGGT 451 Query 16697 TAA 16699 ||| Sbjct 452 TAA 454 >seq5863 Length=517 Score = 120 bits (132), Expect = 5e-23 Identities = 165/227 (73%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||| ||||| | | | |||| || ||||||||||| || ||||| || || |||| Sbjct 228 CGCTAAACGTCACAGGA-AGGTCTTGCGTGATAACATCCAGGGCATCACGAAACCGGCTA 170 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||| ||||||| | |||||||| || ||| |||| || | | || ||||||| Sbjct 169 TCCGTCGTTTGGCTCGCAGAGGTGGAGTGAAACGTATCTCCGGTCTTATATACGAAGAGA 110 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATA-CC 16609 ||| | ||| | || | |||||| | | ||| |||| || ||| || || | || Sbjct 109 CTCGCGGCGTTCTCAAAGTGTTCCTCGAAAACGTGATCCGCGACGCTGTCACATACACCC 50 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 || ||||| || | ||||| |||||| | |||||| | || || || Sbjct 49 GAACACGCCAAGAGGAAGACCGTCACCGCTATGGATGTTGTGTACGC 3 >seq32716 Length=726 Score = 113 bits (124), Expect = 7e-21 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 183 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 124 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| ||| | ||| | || | |||||| Sbjct 123 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCGCGGCGTTCTCAAAGTGTTCCTC 64 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 63 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 4 >seq1631 Length=2179 Score = 111 bits (122), Expect = 2e-20 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 1994 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 2053 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| || | ||| | || | |||||| Sbjct 2054 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACCCGCGGCGTTCTCAAAGTGTTCCTC 2113 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| || ||| || || ||||| ||||| || | ||||| |||||| Sbjct 2114 GAAAACGTGATCCGCGACGCTGTCACATACACCGAACACGCCAAGAGGAAGACCGTCACC 2173 Query 16637 TCCATG 16642 | ||| Sbjct 2174 GCTATG 2179 >seq767 Length=4962828 Score = 93.3 bits (102), Expect = 7e-15 Identities = 177/261 (68%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || || || || | | ||| ||||||| || |||||||| || ||||| || || Sbjct 3810321 CGCGAAACGGCACCGGAAAGTTCTCAGAGATAATATTCAAGGAATAACGAAGCCTGCCAT 3810262 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || | |||| || || || || ||||| ||| | || || || | || || || | Sbjct 3810261 TCGAAGATTGGCGCGACGCGGCGGCGTCAAACGTATATCCGGCCTGATTTACGAGGAAAC 3810202 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || ||| | ||| | || ||| ||| |||||||| || || | || || || Sbjct 3810201 ACGCAGCGTTCTAAAGGTTTTTCTCGAGAACGTTATCCGGGACGCGGTTACTTACACAGA 3810142 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||||| | || || || || ||||||| | ||||| || ||||| | ||||| Sbjct 3810141 GCACGCTAAAAGGAAAACCGTAACAGCCATGGACGTGGTCTACGCTTTGAAGAGGCAAGG 3810082 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | | || ||||| || Sbjct 3810081 GAGAACGCTGTACGGTTTCGG 3810061 >seq36114 Length=783 Score = 86.0 bits (94), Expect = 1e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 120 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 61 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || ||| |||| || | | || ||||||| ||| | ||| | || | |||||| Sbjct 60 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCGCGGCGTTCTCAAAGTGTTCCTC 1 >seq14027 Length=596 Score = 82.4 bits (90), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 100 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 41 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCG 16554 || || ||| |||| || | | || ||||||| ||| Sbjct 40 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCG 3 >seq6378 Length=525 Score = 82.4 bits (90), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||| || || |||||||||||| ||||||| | |||||| Sbjct 110 CGTGATAACATCCAGGGCATCACGAAACCGGCTATCCGTCGTTTGGCTCGCAGAGGTGGA 51 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCG 16554 || || ||| |||| || | | || ||||||| ||| Sbjct 50 GTGAAACGTATCTCCGGTCTTATATACGAAGAGACTCG 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79035461474859