Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq37368 84.2 3e-12 seq31770 84.2 3e-12 seq30797 84.2 3e-12 seq27133 84.2 3e-12 seq26981 84.2 3e-12 seq1794 84.2 3e-12 seq442 84.2 3e-12 seq418 84.2 3e-12 >seq37368 Length=819 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 346 AGATGTTTTTCAAAGGGTAGAAAAGAATAATAAAGTTTCAGCTGAATCTAAAGGGGTCGG 405 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 406 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 446 >seq31770 Length=716 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 180 AGATGTTTTTCAAAGGGTAGAAAAGAATATTAAAGTTTCAGCTGAATCTAAAGGGGTCGG 121 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 120 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 80 >seq30797 Length=707 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 92 AGATGTTTTTCAAAGGGTAGAAAAGAATAATAAAGTTTCAGCTGAATCTAAAGGGGTCGG 151 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 152 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 192 >seq27133 Length=679 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 295 AGATGTTTTTCAAAGGGTAGAAAAGAATAATAAAGTTTCAGCTGAATCTAAAGGGGTCGG 236 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 235 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 195 >seq26981 Length=678 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 132 AGATGTTTTTCAAAGGGTAGAAAAGAATAATAAAGTTTCAGCTGAATCTAAAGGGGTCGG 73 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 72 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 32 >seq1794 Length=2395 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 1928 AGATGTTTTTCAAAGGGTAGAAAAGAATAATAAAGTTTCAGCTGAATCTAAAGGGGTCGG 1869 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 1868 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 1828 >seq442 Length=2449460 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 1061672 AGATGTTTTTCAAAGGGTAGAAAAGAATAATAAAGTTTCAGCTGAATCTAAAGGGGTCGG 1061613 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 1061612 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 1061572 >seq418 Length=4352778 Score = 84.2 bits (92), Expect = 3e-12 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3333 AGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAG 3392 ||| |||||| | |||||||||||| || |||| ||||||| |||| ||||||||| | Sbjct 2679625 AGATGTTTTTCAAAGGGTAGAAAAGAATAATAAAGTTTCAGCTGAATCTAAAGGGGTCGG 2679566 Query 3393 GGTCAAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||| |||||||| | ||| ||||||| || Sbjct 2679565 ACGCAAAAGTGGTCGATTTGGCATATAATAGCCCATAGGTA 2679525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61166046102756