Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq780 80.6 3e-11 >seq780 Length=53957 Score = 80.6 bits (88), Expect = 3e-11 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11473 TATTGTAAATTCAACGCTCTACAAAAAAGTTATCTTATGATTTTTCGCTAAATGTATTGG 11532 ||| | ||||| ||||||||||||||||| | ||||||||||||| ||||| | || || Sbjct 25298 TATAGAAAATTTAACGCTCTACAAAAAAGGTCTCTTATGATTTTTTGCTAACTCTAACGG 25239 Query 11533 CTTAAGAGTTATTTGAGCTCAAAATTCAA 11561 || ||||||||| || ||| | || || Sbjct 25238 TTTCTGAGTTATTTTAGGTCATAGTTGAA 25210 Score = 80.6 bits (88), Expect = 3e-11 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 14442 TTGAATTTTGAGCTCAAATAACTCTTAAGCCAATACATTTAGCGAAAAATCATAAGATAA 14501 || || | ||| || ||||||||| || || || | ||||| ||||||||||||| | Sbjct 25210 TTCAACTATGACCTAAAATAACTCAGAAACCGTTAGAGTTAGCAAAAAATCATAAGAGAC 25269 Query 14502 CTTTTTTGTAGAGCGTTGAATTTACAATA 14530 ||||||||||||||||| ||||| | ||| Sbjct 25270 CTTTTTTGTAGAGCGTTAAATTTTCTATA 25298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63273786344427