Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq483 122 9e-23 seq470 102 9e-17 >seq483 Length=1310704 Score = 122 bits (134), Expect = 9e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 21769 ATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC 21828 ||||||||||||||| | |||||| || |||||||| || || || |||||||||||||| Sbjct 166351 ATACATTTCAGAATGAACATTTTCCATGGCTATCTGGAAGCCATAGAAACATCTTGCCTC 166292 Query 21829 TGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACT 21888 | |||||| || |||||| | | |||||||||||||||| || ||||| Sbjct 166291 AGTGACTTGAACTTCTTGTGAAAATCTCTCAACCAAGTTTTCATTTACAATGCCATCTGA 166232 Query 21889 GGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTT 21948 || ||||| || || | | || || || |||| || || ||||| |||| ||| Sbjct 166231 AGCCGCAAAGAAAGCAAGGACATGCTTGATGAAATGTCTCTCACTATCTTTTAAGGTTTC 166172 Query 21949 CCAATCTAATAAATC 21963 ||| ||| ||||||| Sbjct 166171 CCAGTCTGATAAATC 166157 >seq470 Length=1751055 Score = 102 bits (112), Expect = 9e-17 Identities = 172/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 131864 ATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAATAGAT 131923 |||||||| ||| |||||||| ||||| | |||| |||| | |||| || || | Sbjct 777266 ATGACTCCAGTTTTGCCTATGTTAGCTGAAGCATGCAAATCAATTGAAATGGCGATGAAA 777207 Query 131924 AAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAATTCAT 131983 |||| | | | || ||||| || || | ||||||||||||||| | || || || ||| Sbjct 777206 AAATGTCCAAACGGTATGTACTCTGAAATTAAATATGATGGGGAGAGAGTTCAGATACAT 777147 Query 131984 AAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCATAAA 132043 ||||||| || | || || || ||| |||| ||||||||||| | | |||||| Sbjct 777146 AAAAAAGGTACAGAATTTAAATACTTTTCTAGAGCATTAAAACCTGTGATGGCACATAAA 777087 Query 132044 ATTGATGGATTTGATAAACTGTTGACTGATGCATTTCCCACAGCAAAAAACTTCATTTTA 132103 | |||| | ||| ||| || | || ||||| | || | || | | || ||| Sbjct 777086 GTAAGCTTATTTAAGGAACATTTGCCTAAAGCTTTTCCTAAAGGAGAAGATATGATATTA 777027 Query 132104 GATGCGGAA 132112 ||||| ||| Sbjct 777026 GATGCTGAA 777018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531611824944120