Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq472 226 2e-54 seq747 107 2e-18 seq762 98.7 8e-16 seq466 93.3 4e-14 seq8861 91.5 1e-13 >seq472 Length=1464009 Score = 226 bits (250), Expect = 2e-54 Identities = 527/789 (67%), Gaps = 17/789 (2%) Strand=Plus/Plus Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236 || || || || |||||||| ||||| | || ||||| | ||| || ||| | Sbjct 407346 GCTTACTTCGTCGAATGGGGTGTGTATCCTAGAAAGTTCCCTGTGGACCGCGTTCCGGTT 407405 Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296 || || || | ||| || | ||||| || ||||| ||||| || || || || | || Sbjct 407406 CCGAACCTGACTCATTTGCTCTACGGCTTCATTCCGATTTGTGGTGGTGATGGCATCAAT 407465 Query 32297 GATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGC 32356 || | ||| || |||||||||| | || || |||||||| |||| ||||| Sbjct 407466 GACAGTTTGAAAGAAATTGAGGGCAGTTTTCAAGCACTACAACGTTCATGCAGCGGCCGT 407525 Query 32357 GCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGC 32416 | |||||| |||||| | || ||||| || ||||| || | || ||||| || ||||| Sbjct 407526 GAAGACTTCAAGGTTTCTATCCACGATCCCTGGGCGGCCCTGCAGAAACCTCAAAAGGGA 407585 Query 32417 GTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTG 32476 | || | |||||||| ||||||||||| ||||| || || ||||| | || Sbjct 407586 TTATCGTCCTGGAACGAGCCCTACAAAGGTAACTTCGGGCAGCTGATGCAGTTGAAACAA 407645 Query 32477 GCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCTTT 32536 || || || | |||| | ||||| || ||||| || ||||| ||| | |||||||| Sbjct 407646 GCGAATACTGGCTTAAAGGTCTTACCTTCAATTGGTGGCTGGACATTGGCCGATCCCTTC 407705 Query 32537 TATTTTATGCACGACGCGGAAAAACGGCACGTG-----TTTGTCGATTCCGTCAAAGAGT 32591 | | || | ||| || ||||| |||| || || | ||||| ||||| | Sbjct 407706 T-TCTTCTTCAC----CGACAAAACCAAGCGTGATCGTTTCGTTGCCTCCGTGAAAGACT 407760 Query 32592 TTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCA 32651 | | || |||||| ||||| || || || |||||||||||||||||||| || |||| Sbjct 407761 TCCTCCAAACTTGGAAGTTCTTCGATGGTGTCGACATTGATTGGGAGTTCCCAGGTGGCA 407820 Query 32652 AAGGTGCCAACCCGGCGCTCGGTA-ACGGGGAGCGCGACGCGCACACGTACATTATTTTG 32710 |||| || ||||| | ||||||| | || || | | |||| || | Sbjct 407821 AAGGCGCTAACCCTGATCTCGGTAGTCCTAAAGACGGAGATGTATACGTTCA----GCTC 407876 Query 32711 TTACAAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGA 32769 | | ||||| ||| ||| |||| || || | || | || || | ||| ||||| Sbjct 407877 ATGAAGGAATTACGTCAAATGTTGGATGAGCTGGCGGCTG-AGACTGGTAGAACTTACGA 407935 Query 32770 GTTGACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATGAAGCCGC 32829 |||||| || || || ||||| ||||| || || ||| | || | | || Sbjct 407936 GTTGACCTCTGCCATCAGCGCCGGTTGGGACAAGATCCAAGTCGTGAACTACAAGGAAGC 407995 Query 32830 GCAAAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAA 32889 || || ||| | || | || || | |||||||||||||| || || || |||||||| Sbjct 407996 CCAGAAATACATGGACCATATCTTCGTTATGAGTTACGACTTCAAGGGTGCCTGGTCTAA 408055 Query 32890 CACCGATTTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTA 32949 | | | |||| | ||||| || | || |||||| ||||| ||| | ||| || Sbjct 408056 CGACACTCTGGGACACCAGACTGCTCTATATGCTCCATCTTGGAGTCCTAAGGAAACTTA 408115 Query 32950 CACCACAGA 32958 |||||| || Sbjct 408116 CACCACCGA 408124 >seq747 Length=8313734 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| ||||| ||||| || |||||||| || | ||| || | | Sbjct 5399720 ATGCAGATTTTTGTAAAAACTCTCACTGGTAAAACCATAACATTAGAAGTCGAAGCATCC 5399661 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | |||||| ||||||| || ||||| ||| | || |||||| Sbjct 5399660 GACACCATAGAAAATGTAAAAGCAAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAG 5399601 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || |||| |||| || || |||||| | ||||| | || | ||||||| || Sbjct 5399600 CAGCGACTGATTTTCGCTGGGAAACAACTTGAAGACGGACGGACATTATCCGATTACAAT 5399541 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| |||||| | ||| |||| || | || |||| |||| Sbjct 5399540 ATTCAAAAAGAATCTACTCTCCATTTGGTATTACGTCTGAGAGGTGGAA 5399492 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || |||||||| || | ||| || | Sbjct 5397440 ATGCAAATTTTTGTGAAAACACTTACCGGTAAAACCATCACATTAGAAGTTGAAGCATCT 5397381 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| || ||| |||||||| || | || |||||| Sbjct 5397380 GACACCATTGAAAATGTGAAAGCCAAGATTCAGGATAAAGAGGGAATTCCTCCGGATCAG 5397321 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | || | ||| |||||||| | ||||| | | || | | || || ||| Sbjct 5397320 CAGCGATTGATCTTTGCAGGCAAACAGCTTGAAGACGGCCGTACACTATCTGACTACAAC 5397261 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || ||||| |||||| | ||| |||| |||||| |||| || || Sbjct 5397260 ATCCAGAAAGAATCTACTCTGCATTTGGTTTTGAGACTGCGTGGTGG 5397214 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| ||||| || || || |||||||| || | ||| || | Sbjct 5398353 AATGCAGATCTTTGTGAAAACACTTACCGGTAAAACCATCACATTGGAAGTTGAAGCATC 5398294 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | || ||| || ||| || ||||| || | ||| ||||| Sbjct 5398293 TGACACCATCGAAAATGTGAAAGCCAAGATTCAGGACAAAGAGGGAATTCCCCCAGATCA 5398234 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | |||| |||||||||||| | ||||||| || | | || || || Sbjct 5398233 GCAGCGATTGATTTTTGCGGGCAAACAGCTTGAAGATGGTCGTACATTATCTGACTACAA 5398174 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || ||||| |||||| | ||| |||| |||||| |||| || || Sbjct 5398173 CATCCAGAAAGAATCTACTCTGCATTTGGTTTTGAGACTGCGTGGTGG 5398126 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| ||||| || || || |||||||| || | ||| || | Sbjct 5398809 AATGCAGATCTTTGTGAAAACACTTACCGGTAAAACCATCACATTGGAAGTTGAAGCATC 5398750 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | || ||| || ||| || ||||| || | ||| ||||| Sbjct 5398749 TGACACCATCGAAAATGTGAAAGCCAAGATTCAGGACAAAGAGGGAATTCCCCCAGATCA 5398690 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | |||| |||||||||||| | ||||||| || | | || || || Sbjct 5398689 GCAGCGATTGATTTTTGCGGGCAAACAGCTTGAAGATGGTCGTACATTATCTGACTACAA 5398630 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || ||||| |||||| | ||| |||| |||||| |||| || || Sbjct 5398629 CATCCAGAAAGAATCTACTCTGCATTTGGTTTTGAGACTGCGTGGTGG 5398582 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| || || || |||||||| || | ||| || | Sbjct 5397212 ATGCAGATCTTTGTCAAAACACTTACCGGTAAAACCATCACATTGGAAGTTGAAGCATCT 5397153 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || ||| || ||| || ||||| || | || |||||| Sbjct 5397152 GACACCATCGAAAATGTGAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCGGATCAG 5397093 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | || | |||||||||||| | ||||||| | || | | || || ||| Sbjct 5397092 CAGCGATTGATCTTTGCGGGCAAACAGCTTGAAGATGGCCGTACACTATCTGACTACAAC 5397033 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || ||||| |||||| ||||| |||| |||||| | || || || Sbjct 5397032 ATCCAGAAAGAATCTACTTTACATTTGGTTTTGAGACTCCGTGGTGG 5396986 >seq762 Length=5301712 Score = 98.7 bits (108), Expect = 8e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 109006 TGGCCGGTGTCGTATTTGGAACCGGAACGAATGGCCGCCAGCGGATTTTATTATTTGGGT 109065 ||||| || ||| |||| ||||||| | ||||| || |||||| || || | ||| Sbjct 753865 TGGCCCGTTACGTTTTTGACGCCGGAACAATTGGCCCGCAACGGATTCTACTACCTCGGT 753924 Query 109066 CGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATAATGCGTTGGCTTGAGGGT 109125 ||||||||||| ||| |||| || || || || || ||||| ||| | ||| | || || Sbjct 753925 CGCGGCGACGAGGTGTGCTGTGCTTTCTGTAAGGTAGAAATTATGAGGTGGGTCGAAGGC 753984 Query 109126 GACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGTCCGTT 109172 ||||| || || | || ||| |||| ||||| |||||||| || Sbjct 753985 GACGATCCTGCCGCCGATCATCGGAGATGGGCGCCCCAGTGTCCCTT 754031 >seq466 Length=1632705 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || |||||||| || ||||| || |||||||| | || ||| | Sbjct 1583510 AATGCAAATATTCGTCAAAACCCTTACGGGGAAGACCATTACATTGGAGGTGGAAGCTTC 1583451 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| | | | | || ||| ||||| || || ||||| | || || || Sbjct 1583450 CGACACTATCGAAAATGTCAAAGCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGACCA 1583391 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| || |||||||||||||||| | || | | || ||||| Sbjct 1583390 ACAACGTCTCATCTTTGCCGGGAAACAATTAGAAGATGGCCGCACTCTTTCAGACTATAA 1583331 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||| || ||||| || || | || |||| |||||| | ||||||| || Sbjct 1583330 CATCCAGAAAGAATCCACACTTCACCTGGTTTTGAGACTTAGAGGAGGTAA 1583280 >seq8861 Length=554 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| ||||| || || || |||||||| || | ||| || | Sbjct 241 AATGCAGATTTTTGTGAAAACACTTACCGGTAAAACCATCACATTGGAAGTTGAAGCATC 182 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | || ||| || ||| || ||||| || | ||| ||||| Sbjct 181 TGACACCATCGAAAATGTGAAAGCCAAGATTCAGGACAAAGAGGGAATTCCCCCAGATCA 122 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | |||| |||||||||||| | ||||||| || | | || || || Sbjct 121 GCAGCGATTGATTTTTGCGGGCAAACAGCTTGAAGATGGTCGTACATTATCTGACTACAA 62 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || ||||| |||||| | ||| |||| |||||| |||| || || Sbjct 61 CATCCAGAAAGAATCTACTCTGCATTTGGTTTTGAGACTGCGTGGTGG 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425118693023560