Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_008000.1 Length=14531 Score E Sequences producing significant alignments: (Bits) Value seq753 80.6 2e-11 seq449 78.8 9e-11 >seq753 Length=6731059 Score = 80.6 bits (88), Expect = 2e-11 Identities = 65/78 (83%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 10508 CAGCCGTTCTGAAGTTATAAATAGCGTCCCTAACAAGACTTTGTTTTATATGTATAGCTA 10567 |||||||||| |||||||||||| || |||||| |||||| ||||||||||||| || Sbjct 4773645 CAGCCGTTCTTGAGTTATAAATAGTGTAACTAACACGACTTTCTTTTATATGTATA--TA 4773702 Query 10568 GATAGATATTTAGATTAT 10585 ||| |||| |||| ||| Sbjct 4773703 TATATATATATAGAATAT 4773720 >seq449 Length=2138634 Score = 78.8 bits (86), Expect = 9e-11 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 10508 CAGCCGTTCTGAAGTTATAAATAGCGTCCCTAACAAGACTTTGTTTTATATGTATAGCTA 10567 ||||||||||| |||||||||||| || |||||| |||||| |||||||| ||||| || Sbjct 1133679 CAGCCGTTCTGGAGTTATAAATAGTGTAACTAACACGACTTTCTTTTATATATATAGATA 1133738 Query 10568 GAT 10570 ||| Sbjct 1133739 GAT 1133741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46357491749286