Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq472 253 2e-62 seq747 113 4e-20 seq428 91.5 1e-13 seq8861 89.7 4e-13 >seq472 Length=1464009 Score = 253 bits (280), Expect = 2e-62 Identities = 790/1202 (66%), Gaps = 51/1202 (4%) Strand=Plus/Minus Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888 |||||||| || || || | ||||||||||||||||||||||||||| || |||| || Sbjct 408523 ATATTCATAGCGTTCAGGATATCGCCATTGTCAGCGTCTATTTCCCAAGCGAACAGTCCA 408464 Query 95889 CCTAACTTGTTTTGTTCCACA--TATCGACCTTTAGCTATAACAGAATCAACACTATCAT 95946 || | ||| || ||||| || ||| || || | ||||| || | ||||| Sbjct 408463 CCAAGCTTATT--GTTCCTCACGTATTTCCCCTTCTCAATAACTGATCTTGCGTCATCAT 408406 Query 95947 ATGAAATTAAATCGCCTTTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTC-- 96004 | | | | |||||| | || || | ||||| | |||| || || || || Sbjct 408405 AAGTCACCAGATCGCCGGTTGTAGGATTCCACACGTATGGAGCTTGAGCAACTTTATCGT 408346 Query 96005 AAATTTAACAATATATTTGT----TTATTTCGTTTTTGATTTGGCGATAATCAACAACGC 96060 ||| || || || | | || | || ||| | | ||| || || || | Sbjct 408345 AAAAGTACTGCCATGTTCCTGAAGTGATGCCATTCACGATCTCCCTATAGTCCACCACAC 408286 Query 96061 CATCTTCCCAAGTGCCCGAAACGGGCCCGTTA-CTACTTCCCAAAAAATAGT-TATCGTT 96118 | || | |||||| || ||| || || ||| | ||| ||| || || | |||| Sbjct 408285 CGTCCTGCCAAGTTCCTTTAACTGGACCATTAGCAACT--CCAGTGAAGGGTATGTCGTC 408228 Query 96119 TTCGTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAA--- 96174 | ||| | ||| ||||||||||| || || |||||||| || || || |||| | Sbjct 408227 GTTGTAGTCGTGA-ACTCCAGTCCAACCACGTCCGTACATAGCAACACCGACAACCAGCT 408169 Query 96175 TTTTGCGCGGGTCCACGCCTTGATTTGTGAGCAATT---TAACGGCATGGTCCGTGTTGT 96231 ||||| || || || ||||| || |||| | | | | ||| ||| ||| Sbjct 408168 TTTTGGGCTGG---ACACCTTGG---GTCAGCAGGTACCTGATACCGAAGTCGGTGGTGT 408115 Query 96232 ACAGCTCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGT 96291 | || || || ||||| || || || || | ||| |||| ||||| | || Sbjct 408114 AAGTTTCCTTAGGACTCCAAGATGGAGCATATAGAGCAGTCTGGTGTCCCAGAGTGTCGT 408055 Query 96292 TTGACCACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCG 96351 | ||||| || || || || ||||| ||||| | || || | ||| | | | || || | Sbjct 408054 TAGACCAGGCACCCTTGAAGTCGTAACTCATAACGAAGATATGGTCCATGTATTTCTGGG 407995 Query 96352 CAACGTCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACT 96411 | | | ||| || || || || ||||| ||||| ||||| ||| ||||||| Sbjct 407994 CTTCCTTGTAGTTCACGACTTGGATCTTGTCCCAACCGGCGCTGATGGCAGAGGTCAACT 407935 Query 96412 CGTACGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTTAAT 96470 |||| ||| | || || | ||| || | ||| || ||||| || |||||||| | Sbjct 407934 CGTAAGTTCTACCAGTCT-CAGCCGCCAGCTCATCCAACATTTGACGTAATTCCTTCATG 407876 Query 96471 AGAATGTTGTACGTGTCAGCGTCGCGCTCTTTGT---TGCCGAGCGTCGGGTTGGCGCCT 96527 || || |||| | | || | ||||| | ||||| ||||| |||||| Sbjct 407875 AGC----TGAACGTATA--CATCTCCGTCTTTAGGACTACCGAGATCAGGGTTAGCGCCT 407822 Query 96528 TTACCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAA 96587 || || || || || ||||| || ||||| || || ||||| || |||||| || | Sbjct 407821 TTGCCACCTGGGAACTCCCAATCAATGTCGACACCATCGAAGAACTTCCAAGTTTGGAGG 407762 Query 96588 AATTCTCTGACGGAGTCTACAAA-----CACGCGCCGTTTTTCCGCGTCGTGCATGTAAT 96642 || ||| | |||||| | || || ||||| ||||| || ||| | | | Sbjct 407761 AAGTCTTTCACGGAGGCAACGAAACGATCACGCTTGGTTTTGTCG----GTGAA-GAAGA 407707 Query 96643 AGAACGGGTCGGACAGTGTCCAGCCGCCGATAGACGGCA-GAATTTTAAGGTGTGGATTA 96701 |||| || |||| || ||||||||| || || || || | || |||||| | ||| Sbjct 407706 AGAAGGGATCGGCCAATGTCCAGCCACCAATTGAAGGTAAGACCTTTAAGCCA-GTATTC 407648 Query 96702 GCCAGTTTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGAC 96761 || |||| | ||||| ||| || ||||| |||||||||||||||||||| | || Sbjct 407647 GCTTGTTTCAACTGCATCAGCTGCCCGAAGTTACCTTTGTAGGGCTCGTTCCAGGACGAT 407588 Query 96762 ACGCCCTTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCT 96821 | |||||||| ||||| || | || ||||| || ||||| |||| ||| || || ||| Sbjct 407587 AATCCCTTTTGAGGTTTCTGCAGGGCCGCCCAGGGATCGTGGATAGAAACCTTGAAGTCT 407528 Query 96822 GAACGGCCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCA 96881 |||||| ||| || ||||| || |||| |||||| || || ||| | Sbjct 407527 TCACGGCCGCTGCATGAACGTTGTAGTGCTTGAAAACTGCCCTCAATTTCTTTCAAACTG 407468 Query 96882 TCGTTAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTG 96941 || || | ||| || || |||||||| || || || ||||| | |||||| | || ||| Sbjct 407467 TCATTGATGCCATCACCACCACAAATCGGAATGAAGCCGTAGAGCAAATGAGTCAGGTTC 407408 Query 96942 GGCAGCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATAC 97001 || | ||| || |||||| || || || | | |||||| |||||||| || || || Sbjct 407407 GGAACCGGAACGCGGTCCACAGGGAACTTTCTAGGATACACACCCCATTCGACGAAGTAA 407348 Query 97002 GC 97003 || Sbjct 407347 GC 407346 >seq747 Length=8313734 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | |||||| | ||| || ||||| || ||||| ||||||||||| | | Sbjct 4903442 CCTCCACGAAGACGCAGTACAAGATGGAGTGTGGATTCTTTTTGAATGTTGTAGTCTGAC 4903383 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| |||| || ||||| ||| | || || |||||||| || ||| Sbjct 4903382 AAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGATCAGGAGGA 4903323 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| || | | |||||| | | | ||||| |||||| | Sbjct 4903322 ATTCCTTCTTTGTCTTGGATCTTCGCCTTCACATTCTCAATTGTGTCCGAAGGCTCCACT 4903263 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || ||||| ||||| |||||||| Sbjct 4903262 TCTAAAGTGATGGTCTTGCCGGTTAGAGTTTTCACAAAGATCTGCAT 4903216 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||||||| | | || | ||| || || || |||||||| || |||||||| | | Sbjct 4903670 CCTCCTCGTAGACGTAACACTAAATGGAGTGTAGATTCCTTTTGAATATTGTAGTCTGAC 4903611 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| |||| || ||||| ||| | || || |||||||| || ||| Sbjct 4903610 AAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGATCAGGAGGA 4903551 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| || | | |||||| | | | ||||| | || | Sbjct 4903550 ATTCCTTCTTTGTCTTGGATCTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCTTCTACT 4903491 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||||||||| ||||| || || |||||||| Sbjct 4903490 TCCAAAGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAGATCTGCAT 4903444 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| ||||| || || || || || ||||||||||||| Sbjct 5399038 CCACCACGCAGTCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATGTTGTAGTCGGAT 5399097 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || || | |||||||||||| | || | |||||| || ||| ||| Sbjct 5399098 AGTGTACGGCCATCTTCAAGCTGTTTGCCCGCAAAGATCAACCGCTGCTGATCCGGAGGA 5399157 Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || |||||| ||||| | | | ||||| | || Sbjct 5399158 ATTCCCTCTTTGTCCTGAATCTTTGCT--TTCACATTCTCAATGGTGTCAGATGCTTCAA 5399215 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 5399216 CTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCAT 5399264 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| ||| | || || || || || ||||||||||| | Sbjct 5396986 CCACCACGGAGTCTCAAAACCAAATGTAAAGTAGATTCTTTCTGGATGTTGTAGTCAGAT 5397045 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || || | |||||||||||| | || | ||||| || ||| ||| Sbjct 5397046 AGTGTACGGCCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCCGGAGGA 5397105 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| ||| | ||| ||||| | | | ||||| | || Sbjct 5397106 ATTCCCTCTTTGTCCTGAATCTTGGCT--TTCACATTTTCGATGGTGTCAGATGCTTCAA 5397163 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 5397164 CTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTGACAAAGATCTGCAT 5397212 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| |||||| || || || || || ||||||||||| | Sbjct 5398126 CCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCAGAT 5398185 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || || | |||||||||||| |||| | ||||| || || || Sbjct 5398186 AATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGGGGA 5398245 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| ||| | ||| ||||| | | | ||||| | || Sbjct 5398246 ATTCCCTCTTTGTCCTGAATCTTGGCT--TTCACATTTTCGATGGTGTCAGATGCTTCAA 5398303 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct 5398304 CTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCATT 5398353 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| |||||| || || || || || ||||||||||| | Sbjct 5398582 CCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCAGAT 5398641 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || || | |||||||||||| |||| | ||||| || || || Sbjct 5398642 AATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGGGGA 5398701 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| ||| | ||| ||||| | | | ||||| | || Sbjct 5398702 ATTCCCTCTTTGTCCTGAATCTTGGCT--TTCACATTTTCGATGGTGTCAGATGCTTCAA 5398759 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct 5398760 CTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCATT 5398809 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| |||||| || || || || || ||||||||||| | Sbjct 5397214 CCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCAGAT 5397273 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| || | |||||||| ||| | || | ||||| || ||| ||| Sbjct 5397274 AGTGTACGGCCGTCTTCAAGCTGTTTGCCTGCAAAGATCAATCGCTGCTGATCCGGAGGA 5397333 Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||| || || || ||| ||||| | | | ||||| | || Sbjct 5397334 ATTCCCTCTTTATCCTGAATCTTGGCT--TTCACATTTTCAATGGTGTCAGATGCTTCAA 5397391 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct 5397392 CTTCTAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAAATTTGCAT 5397440 >seq428 Length=3255295 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 29344 GGCGGCGTGGGGCTGAATCTAACGGGCGGCAACCACCTCGTTTTGTTGGAGCCGCACTGG 29403 || |||||||| |||| || |||| ||||||||| | || |||| ||||||||| Sbjct 2870424 GGGGGCGTGGGTTTGAACCTGTGCGGCGCCAACCACCTGTTCCTGCTGGACCCGCACTGG 2870483 Query 29404 AACCCGCAGGTGGAGTTGCAGGCGCAGGGCCGCATCCACCGTTTGGGCCAGCGCAAACGC 29463 ||||||||| | ||| ||||||||||| |||| || |||| | |||||| ||| | Sbjct 2870484 AACCCGCAGCTCGAGCAGCAGGCGCAGGACCGCGTCTACCGCGTCGGCCAGGACAAGACC 2870543 Query 29464 GCGCACGTGTACA 29476 | |||| | |||| Sbjct 2870544 GTGCACATCTACA 2870556 Score = 86.0 bits (94), Expect = 5e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 29344 GGCGGCGTGGGGCTGAATCTAACGGGCGGCAACCACCTCGTTTTGTTGGAGCCGCACTGG 29403 || |||||||| |||| || |||| ||||||||| | || |||| ||||||||| Sbjct 2871850 GGGGGCGTGGGTTTGAACCTGTGCGGCGCCAACCACCTGTTCCTGCTGGACCCGCACTGG 2871909 Query 29404 AACCCGCAGGTGGAGTTGCAGGCGCAGGGCCGCATCCACCGTTTGGGCCA 29453 ||||||||| | ||| ||||||||||| |||| || |||| | ||||| Sbjct 2871910 AACCCGCAGCTCGAGCAGCAGGCGCAGGACCGCGTCTACCGCGTCGGCCA 2871959 >seq8861 Length=554 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| |||||| || || || || || ||||||||||| | Sbjct 14 CCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCAGAT 73 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || || | |||||||||||| |||| | ||||| || || || Sbjct 74 AATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGGGGA 133 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| ||| | ||| ||||| | | | ||||| | || Sbjct 134 ATTCCCTCTTTGTCCTGAATCTTGGCT--TTCACATTTTCGATGGTGTCAGATGCTTCAA 191 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| ||||||||||| ||||| || ||||| ||||||||||||||| Sbjct 192 CTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAAATCTGCATT 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404873422734370