Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq466 585 3e-162 seq483 123 3e-23 >seq466 Length=1632705 Score = 585 bits (648), Expect = 3e-162 Identities = 1206/1782 (68%), Gaps = 30/1782 (2%) Strand=Plus/Plus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || |||| || ||||| |||| | || ||| ||||| || || | ||| ||||| || Sbjct 916827 TTATCCACAGTAAATTGTATGGCATTGGCTGCCGGTTTTGTTCGCAAATAATACATCCCT 916886 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 ||||||| ||| | ||||| || ||||| ||| |||| ||| || |||| Sbjct 916887 GTTTTTAAACCCATTTTCCATGAATAGAAATGAATAGAAGTTAATTTTCCGTAGTTCGGT 916946 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || || | || ||||| | ||||||||||||||| || || ||||| | || |||||| Sbjct 916947 TCAGCAACGTGTATATTAAAAGATTGACTTTGATCAATAAAAGCTCCACGATCAGCAGCC 917006 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 62079 |||| ||| | || || || ||||||||||| || ||||| || || |||| | || Sbjct 917007 ATTTGTATTGTTGTTTTGACTGAAATTTCCCAAACTGTCTTATATAAGTCCCTTATT-TC 917065 Query 62080 TTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62136 | || | || |||| || || |||||| || ||||| ||| || || Sbjct 917066 TGTAGGTATACTTTCGATATTTTGTATAGATCCATTATTGTGTATAATGAGATTTTTCAT 917125 Query 62137 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62196 || |||| |||||| | | || || ||| | | ||| | ||| |||| || ||||| Sbjct 917126 TTCCTCATCCCATAAATCTGCTTCTGTCAAATCACGAAGTAAATGATGATTTACAACTTG 917185 Query 62197 AAATTCTCCAGACAATAC---TCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGA 62253 |||||||||||| || || ||| || ||||||||| || | || || | ||| Sbjct 917186 AAATTCTCCAGATAAAACACGTCTTTGA---TAAATATTAGAAGTGAAGGGCTCAAAAGA 917242 Query 62254 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACT 62313 ||||||||||| ||||| ||||| ||||| ||||| ||||| || || ||||| | | Sbjct 917243 TTCATTATTTCCTAAAATCTGAGCTGTTGAGGCAGTGGGCATTGGGGCTACCAAAAGAGA 917302 Query 62314 ATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62371 ||| | |||||| ||| | | || || ||||||| || ||| | ||| | ||| Sbjct 917303 ATTACGAAGACC--ATGCTTGGCAATGTTTTCTTTTAAAGCAGTCCAGTCCCATAAATCT 917360 Query 62372 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 62431 | || |||| || || ||| || ||||| | Sbjct 917361 GTTGGATTTTTATTCCACATTTCGTACTGTAATATGCCTCGACTTGCAGGGCATCCTTCG 917420 Query 62432 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62491 ||||| || || ||| | ||| || |||||||||||||| ||||||| ||| || || Sbjct 917421 TATGTTTCATACACTCCATACTTTTCTGCTAGTTCACAACTTGCCTCTAGTGCTCCATAG 917480 Query 62492 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAA 62551 ||||| ||||| || || | | ||||| | ||||| | || || | || || Sbjct 917481 TAAATAGTTTCAAATATTTGTTGATTTAATTTAATAGCTTCTGGACTTTCGTAAGGTAAA 917540 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 | | |||||| || || || | ||||||||||| || || |||||||||||||| Sbjct 917541 CGCATTAAAATAAAAGCATCAGCAAGACCTTGAACACCTATTCCAATAGGTCTATGTCTA 917600 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 |||||| ||| ||||| |||| ||| |||||||| | ||| || |||||||| | | Sbjct 917601 AGATTAGATTTTTTTGCTTCCGGAACAGGGTAATAATTTACATCAATGATTTTATTCAAA 917660 Query 62672 TTT-CTGACAATTACTTTGACCA-CATCCTTCAGTTTGAGAAAATCAAATCGCCC---AT 62726 ||| ||| | || ||| | | | || || | ||| ||| | | || || Sbjct 917661 TTTTCTGTTA--TAGTTTTAGTAACTTCTTTTAATTTCTTAAAGTTATATGTTTTGTTAT 917718 Query 62727 CTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 62786 | |||||||| || | || | ||| || | || || || || || |||| | || Sbjct 917719 CATCAACAAACATATTTAGCGCTATAGAGGCTAAGTTGCATACTGCCACTTCATCATCAG 917778 Query 62787 CCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 62846 | ||||| | ||| |||||||| || |||||||| || ||||| |||||||||| | Sbjct 917779 ATGTATATTCAACTATTTCAGTGCACAGGTTACTACATTTTATGGTACCTAAATTTTTCT 917838 Query 62847 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCT 62906 ||||||| ||| | ||||| | ||| ||| | | ||| ||||||||||||| || | | Sbjct 917839 GATTACTTTTTCTATTACATGAATCTTTAAATAACATGTATGGAGTACCAGTCTCTACTT 917898 Query 62907 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA--TCTCTT 62964 ||| |||||| || |||||||| | ||| | ||| ||| | | ||| | ||| || Sbjct 917899 GAGCTTCTATTATTGCTTTCCAAAGAACTTGTGCCCTTACTT--GTTTTACAAATCTATT 917956 Query 62965 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCC 63024 |||| |||| ||| | ||| || ||| || || | ||||||| | | | || Sbjct 917957 TTCTTTTTCATATGTTTCATATAAGGATTCAAATTCTTTTCCCCAACAGTCAGCTAACCC 918016 Query 63025 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63084 || || |||| |||||||| | | ||| | || |||| | |||| |||||| || Sbjct 918017 TGGGCAATCATGAGGACACATAAGGGTCCATACGCCATCATTTTCAACTCTTTTCATGAA 918076 Query 63085 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63144 |||||||| ||||| | || ||| || || |||| | ||| || ||||| || Sbjct 918077 AAGATCAGGTATCCACAATGCATAAAAAAGTTCCCTGGCACGTACTTCTTCTTTTCCAGT 918136 Query 63145 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63204 || || || | ||| | ||| | | ||||| | ||||||||||||||| || | || Sbjct 918137 GTTTTTCTTTAAATCTAAGAATTCAAATATATCGGCATGCCACGGTTCCAAATAGACTGC 918196 Query 63205 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63264 | | ||||||| || || || ||||| ||||| | |||||||| || ||||| ||||| Sbjct 918197 AAAAGCTCCAGGGCGCTTATTACCTCCTTGATCAACATATCTAGCTGTATTATTGTAAAC 918256 Query 63265 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACT 63324 || |||||||| | || |||||| ||| |||||| || |||| ||||| | || | Sbjct 918257 TCGTAACATTGGTACAAGACCATTTGATACACCATTTGTTCCTGCTATATAAGTACCTTT 918316 Query 63325 GGCACGAATATTACT--AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382 || | ||| | | | || | ||| ||||| ||||| |||||| || || || Sbjct 918317 AGCCCTTATA-CAGTGGACATG-GACACCAATTCCACCTGCAGATTTAGATATCAAAGCA 918374 Query 63383 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 63442 || | ||||| ||||| || || || || || || ||||| |||| | ||||||| Sbjct 918375 CACTGCTTTAAGGTATCGTAAATTCCTTCAATGCTGTCATCTTTCATTGCCACTAGAAAA 918434 Query 63443 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTA 63502 || || | |||| | || |||| | || |||||||| || || ||||| Sbjct 918435 CATGATGATAGTTGGGGGCGTGGAGTTGCAGCTGAGAATAAGGTTGGGCTGGCATGAGTG 918494 Query 63503 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63562 || |||| |||||||||| ||||| || | || |||| || ||||| |||| Sbjct 918495 AAATATTTCTCAGAAAGTAAGTTGTATGTATTTATGGCTGCATCAATATCTTCACCATGA 918554 Query 63563 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 ||||| | || || ||||| | ||| || ||||||| |||| Sbjct 918555 ATTCCAATTGACACTCGCATCAGCATATGTTGAGGTCGTTCA 918596 >seq483 Length=1310704 Score = 123 bits (136), Expect = 3e-23 Identities = 146/197 (74%), Gaps = 7/197 (4%) Strand=Plus/Minus Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||||| || Sbjct 173463 AATGTAAGTCCCGGCATAAGGCCCCGCTTTTTGAGCCAGAAGATGGAAGCAAAACTGCCT 173404 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || || || ||||||||||| || |||||||||| || || || || || | || | Sbjct 173403 GAGAAAAAGATTCCTTCTACAGCTGCAAAGGCAACAATCCTTTCACC--AAATGTTGCAG 173346 Query 32832 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 || || ||||||| | |||||||||| || ||||| |||||||| || | |||| Sbjct 173345 TCTTGCTTGCAATCCACTGTAGAGCCCAATCTGCTTTCTTCTTTACACAGGGAAGAGTCT 173286 Query 32887 CTATAGCATTAAAGAGA 32903 | | |||||||| ||| Sbjct 173285 CAACCGCATTAAACAGA 173269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633287755654800