Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq472 316 2e-81 >seq472 Length=1464009 Score = 316 bits (350), Expect = 2e-81 Identities = 804/1216 (66%), Gaps = 14/1216 (1%) Strand=Plus/Minus Query 51655 AGTCGGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGC 51714 ||||||||||||| |||| | || |||| || || | || | ||||||| | Sbjct 408126 AGTCGGTGGTGTAAGTTTCCTTAGGACTCCAAGATGGAGCATATAGAGCAGTCTGGTGTC 408067 Query 51715 CCAGATCGGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCA 51774 ||||| | ||| ||||| ||||||||||| ||||| |||| | ||| || | |||| Sbjct 408066 CCAGAGTGTCGTTAGACCAGGCACCCTTGAAGTCGTAACTCATAACGAAGATATGGTCCA 408007 Query 51775 ACTGCGTCTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGG 51834 | |||| || ||||| |||||||| || || || | || |||||||||| Sbjct 408006 TGTATTTCTGGGCTTCCTTGTAGTTCACGACTTGGATCTTGTCCCAACCGGCGCTGATGG 407947 Query 51835 CGCTGGTCAACAGGTACGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCA 51894 | ||||||| ||| | | || | || || ||| || | ||| | || | Sbjct 407946 CAGAGGTCAACTCGTAAGTTCTACCAGTCTCAGCCGCCAGCTCATCCAACATTTGACGTA 407887 Query 51895 GCTCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCAGGTCGGGAT 51954 || ||| ||| ||||| | || || | ||| || || || || | Sbjct 407886 ATTCCTTCATGAGCTGAACGTATACATCTCCGTCTTTA---GGACTACCGAGATCAGGGT 407830 Query 51955 TGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAG 52014 | ||||||||||| || || |||||||| || | |||||| || |||||||||||||||| Sbjct 407829 TAGCGCCTTTGCCACCTGGGAACTCCCAATCAATGTCGACACCATCGAAGAACTTCCAAG 407770 Query 52015 TCAGCAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGTCGTGCAGGA 52074 | | || || || || || | ||||| | || ||| | |||| | || Sbjct 407769 TTTGGAGGAAGTCTTTCACGGAGGCAACGAAACGATCACGCTTGGTTTTGTCGGTGAAGA 407710 Query 52075 AGAAGAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGAT 52134 ||||||| ||||||| || ||||| || || || || || | | ||| | || || Sbjct 407709 AGAAGAAGGGATCGGCCAATGTCCAGCCACCAATTGAAGGTAAGACCTTTAAGCCAGTAT 407650 Query 52135 TGGCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCG 52194 | || |||| | ||||||||| || ||||| || ||||| || |||||||||| || Sbjct 407649 TCGCTTGTTTCAACTGCATCAGCTGCCCGAAGTTACCTTTGTAGGGCTCGTTCCAGGACG 407590 Query 52195 AGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGT 52254 | | || || || ||||||||||| ||||||||||||||||| || | ||||| |||| Sbjct 407589 ATAATCCCTTTTGAGGTTTCTGCAGGGCCGCCCAGGGATCGTGGATAGAAACCTTGAAGT 407530 Query 52255 CCGACCTGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGC 52314 | | ||| ||| || ||||| | |||| |||||| || || ||||| | Sbjct 407529 CTTCACGGCCGCTGCATGAACGTTGTAGTGCTTGAAAACTGCCCTCAATTTCTTTCAAAC 407470 Query 52315 TGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGT 52374 |||| |||||||| || || || || || |||||||||||||| |||| ||| | ||||| Sbjct 407469 TGTCATTGATGCCATCACCACCACAAATCGGAATGAAGCCGTAGAGCAAATGAGTCAGGT 407410 Query 52375 TCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGT 52434 |||| | ||| || | || || || || || | || || ||||||||||| |||| Sbjct 407409 TCGGAACCGGAACGCGGTCCACAGGGAACTTTCTAGGATACACACCCCATTCGACGAAGT 407350 Query 52435 AGGCCGCTTTCACGGTGCCCGACGTGTCGACGTAGGGCAGATTGTTTTCGCGCCACTCG- 52493 | || | ||| | ||||| || | | ||||| || ||||| | ||| | | Sbjct 407349 AAGCGCCCACCACTTTTCCCGAAGTCTGCTTGAAGGGCTTAT--TTTTCTCACCAATAGA 407292 Query 52494 -TAGTTGAGGGCGGCCAGATGGCTACCGTCCGTGTCGGCCACCAGAGTCTCGACGCCCGC 52552 || | ||| | || ||||||||| || ||||| || || | | ||||||||| | Sbjct 407291 ATAATCGAGAGGCCTCAAATGGCTACCATCAGTGTCAGCTACTACGATTTCGACGCCCTC 407232 Query 52553 ACTAATGGAACAGCCGTCCGAATTGCACAGGCGCACCTTCATCGAGTACCGGCCGCCCTT 52612 ||| | || ||||| || ||||| || |||| |||| ||| | |||||||| Sbjct 407231 GCTAGAGCTGCATCCGTCTGAGTTGCAGAGCTCGACCTGCATCTGGTATCTTCCGCCCTT 407172 Query 52613 GTCGATGTGGAAACTCGCCCGTTTCGGGCCGGCGTCGCCCGACCACACGATCTTGTCGTC 52672 | | | |||| ||| | | | || | || | || ||| || ||| | || Sbjct 407171 CTTCACTTTGAAAGCGGCCGATGTGGCGCTGCCGGCACCGCTCCAGACTTCCTTCTTATC 407112 Query 52673 CAGATAGAC-GTAGGCATCGCGACCGATGTCGCCGTACCAAACGTTCCACGACACTTCAA 52731 || ||| | | | | || ||| ||||||| ||| |||||||| || | Sbjct 407111 GAGCAGGACTCTGGACTTGTCGGCCG-CGTCGCCGGTCCACACGTTCCAGTTGACGGAGA 407053 Query 52732 TGTTGACGCTCTCGTGTCGGGTGACGAGTTCGTTGTATGCCGTGGCCGTTTGACTGACCT 52791 || | || || | ||| ||||| | |||||| || ||||||| ||| |||| | Sbjct 407052 CGTCGGCGGCGTCCTTCTTGGTCACGAGCTGGTTGTAAGCTGTGGCCGCTTGGTTGACTT 406993 Query 52792 GCACCAGGGCGTAGCTGCGATCGGCCCAATCGATGGTAGGCGTACCGGGCGCGGCCGC-- 52849 || | ||| | |||| ||| |||| ||| | | || | || |||| |||||| Sbjct 406992 CGACGATCGCGAACGTGCGCTCGCCCCAGCCGAGGTTCGGTTTCCCTGGCG-GGCCGCAG 406934 Query 52850 --GCCAACGCCGAACG 52863 ||| ||| |||||| Sbjct 406933 GAGCCGACGGCGAACG 406918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537311126901480