Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq762 114 1e-20 seq747 102 7e-17 >seq762 Length=5301712 Score = 114 bits (126), Expect = 1e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 105483 CAAAGGCCAGAGCAATTGGCCGAAGCCGGTTTTTACTACACCGGCAAAGGTGATAAAGTC 105542 |||| || ||| || |||| || ||||| || | ||| || ||| ||||||| ||| Sbjct 754207 CAAAAACCCGAGGAACTGGCAGAGGCCGGATTCTTCTATACAGGCCAAGGTGACAAAACG 754266 Query 105543 AAATGTTTTTATTGCGACGGCGGCCTTAAGGATTGGGCAAACGCCGACGAACCGTGGGAG 105602 ||||| || ||||||||||| || || || ||||||| || || |||| |||||||| Sbjct 754267 AAATGCTTCTATTGCGACGGAGGGCTAAAAGATTGGGAAAGCGATGACGTTCCGTGGGAA 754326 Query 105603 GAACATGCACGTTGGTTTGATCGCTGTTCGTTCGTAAAACTGGTCAAAGGACACGACTAC 105662 | || || | ||||| || ||||| ||| ||| || |||| ||||||| |||||| Sbjct 754327 CAGCACGCCAGATGGTTCGACCGCTGCGCGTACGTGCAATTGGTGAAAGGACGTGACTAC 754386 Query 105663 GTGCAG 105668 | ||| Sbjct 754387 ATTCAG 754392 >seq747 Length=8313734 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||| ||||| | || || |||||||| || | ||| ||| | | Sbjct 5399720 ATGCAGATTTTTGTAAAAACTCTCACTGGTAAAACCATAACATTAGAAGTCGAAGCATCC 5399661 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | | | | |||||| ||||||| |||||||| ||| |||| ||||| Sbjct 5399660 GACACCATAGAAAATGTAAAAGCAAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAG 5399601 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATA 111364 || | || |||| || || |||||| | ||||| | | | ||| ||||||| | Sbjct 5399600 CAGCGACTGATTTTCGCTGGGAAACAACTTGAAGACGGACGGACATTAT--CCGATTACA 5399543 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 |||| |||||||||||||| || ||||| || || |||||| | ||||| Sbjct 5399542 ATATTCAAAAAGAATCTACTCTCCATTTGGTATTACGTCTGAGAGGTGG 5399494 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| ||||| | ||||| |||||||| || | ||| ||| | Sbjct 5399264 ATGCAGATCTTTGTGAAAACACTTACCGGTAAAACCATCACACTAGAAGTTGAAGCATCT 5399205 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||| ||| ||| |||||||| || |||| ||||| Sbjct 5399204 GACACCATTGAGAATGTGAAAGCAAAGATTCAGGACAAAGAGGGAATTCCTCCGGATCAG 5399145 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATA 111364 || || | || | |||||||||||| | |||||| | | ||||| |||| || | Sbjct 5399144 CAGCGGTTGATCTTTGCGGGCAAACAGCTTGAAGATGGCCGTACACTAT--CCGACTACA 5399087 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 | || || ||||||||||| || || || || ||| | ||||| ||||||| Sbjct 5399086 ACATCCAGAAAGAATCTACTCTGCACTTGGTTTTGAGACTGCGTGGTGGCA 5399036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422815913464600