Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq743 89.7 1e-14 >seq743 Length=9954263 Score = 89.7 bits (98), Expect = 1e-14 Identities = 87/111 (78%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 3371 CTTTTCA-CAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTC 3429 ||||||| ||||| |||| | || ||| |||| |||| | ||||||||| | Sbjct 8647209 CTTTTCAACAAATTCGGTTCATCCGGCGAGGTGGAGCGGCACGACGCGCTCTGCATCTTG 8647150 Query 3430 CCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 || |||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 8647149 CCCCTGAACGTAGTCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTC 8647099 Score = 84.2 bits (92), Expect = 5e-13 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 3358 ATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGA 3417 || ||| ||| || |||||||| | ||| | || ||| | | | | | |||| | Sbjct 8592694 ATGACTAAATGCACGTTTCACAAGTTCGGCGCGTCCGGCAGCATACAGACCCACGACAGT 8592753 Query 3418 CTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGG 3477 |||||| |||||||| |||| | ||||||||||||| ||||| ||||||||||||||| Sbjct 8592754 CTCTGCGTCCTCCCGCTGAACATCGTCAACGAGAAGACGTACATCTTCCTCTGGTTCTGG 8592813 Query 3478 T 3478 | Sbjct 8592814 T 8592814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12474067300500