Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq483 87.8 3e-12 >seq483 Length=1310704 Score = 87.8 bits (96), Expect = 3e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 160177 CTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATT 160236 ||||||| ||| |||| ||| | || ||| || |||||||| | || ||||| Sbjct 166390 CTCCTTCGGATCTCTGATGTAGGTATCTATAAGCAGGGAATACATTTCAGAATGAACATT 166331 Query 160237 TTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACT-GCACCTCCTGTG 160295 ||| ||||| ||||| ||| |||||| || | ||||| || ||| | || || |||| Sbjct 166330 TTCCATGGCTATCTGGAAGCCATAGAAACATCTTGCCTC-AGTGACTTGAACTTCTTGTG 166272 Query 160296 TGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACA 160355 || || | | ||| || |||| || | || || | |||||||||||||| | | Sbjct 166271 AAAATCTCTCAACCAAGTTTTCATTTACAATGCCATCTGAAGCCGCAAAGAAAGCAAGGA 166212 Query 160356 CGTGAGAGATGAAATGTCTCTC 160377 | || ||||||||||||||| Sbjct 166211 CATGCTTGATGAAATGTCTCTC 166190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794723202119280