Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_019720.1 Length=44120 Score E Sequences producing significant alignments: (Bits) Value seq21284 118 3e-22 >seq21284 Length=642 Score = 118 bits (130), Expect = 3e-22 Identities = 243/358 (68%), Gaps = 4/358 (1%) Strand=Plus/Minus Query 33169 TGCAGTTGCCGTCGATTGGGATCAACGGATAGGCAGGGTTAAGCCCTTTCAGGTATTTGT 33228 ||||||| |||| ||| || ||| | | | ||| || || ||||||||||| || | Sbjct 642 TGCAGTTCCCGTTGATAGGAGTCATAGCCCATGAAGGATTCAGGCCTTTCAGGTACTTCT 583 Query 33229 TACCGCCATCAATGATTAGCTTCTTGAACGTGGCTTCATTAGCATCTGTCAGCTTCGCAA 33288 ||||||||| |||| || ||||||| || ||||| || || || ||||| || || | Sbjct 582 GACCGCCATCTATGACCAGTTTCTTGACTGTTGCTTCGTTCGCGTCAGTCAGTTTGGCTA 523 Query 33289 CTACCAGGCTTCCATTAACGGCTTCCTTTCCAGTGTCGAACAGA-ACCAGCATACCCTCA 33347 | || ||||||||||| || | || |||||| || || || |||| ||| ||| Sbjct 522 CAACAAGGCTTCCATTCACTGGCTCGCGTCCAGTATC-TACTGACACCATATGACCTTCA 464 Query 33348 GGAACGCTAAGGCCGGTAGGAGCTGTCATTGAGTCGCCCTGAACCCTGAGCCAGAAGGCG 33407 || | ||| | || ||| | ||||| || || || | |||| | |||||||| | Sbjct 463 GGGATGCTTTGACCTACAGGTGAGGTCATGGAATCACCTTCAACCTTCAGCCAGAATCCA 404 Query 33408 TCACCGACAACGTGACAATCTGATTCATACCACTCATCCACTGCCTGAGGGTTGTACGGC 33467 | || | | || | || |||||||| ||||| | ||| | ||| || Sbjct 403 TTGCCTAATAAGTTAACGTCACTGTCATACCATTCATCAATGTCCTTGATATCGTAGGGT 344 Query 33468 TCTACGGCCTCACTCCATGCACCTGCGCTAACCCAGCTAATCAACGGAAACTTTTCCC 33525 || || |||| ||| | ||| || |||||| ||||||||| ||| | |||||| Sbjct 343 TCACAAGCTTCACACCACGAACCAGCTCTAACCATGCTAATCAATGGATA--TTTCCC 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140989594433292