Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq1767 1297 0.0 seq1770 1173 0.0 seq21284 159 1e-34 >seq1767 Length=9911 Score = 1297 bits (1438), Expect = 0.0 Identities = 724/727 (99%), Gaps = 0/727 (0%) Strand=Plus/Plus Query 22961 ACTAACTCTTCTGTCGAAGTGATATTTTTAGGCTTATCTACCAGTTTTAGACGCTCTTTA 23020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACTAACTCTTCTGTCGAAGTGATATTTTTAGGCTTATCTACCAGTTTTAGACGCTCTTTA 60 Query 23021 ATATCTTCAGGAATTATTTTATTGTCATATTGTATCATGCTAAATGACAATTTGCTTATG 23080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATATCTTCAGGAATTATTTTATTGTCATATTGTATCATGCTAAATGACAATTTGCTTATG 120 Query 23081 GAGTAATCTTTTAATTTTAAATAAGTTATTCTCCTGGCTTCATCAAATAAAGAGTCGAAT 23140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GAGTAATCTTTTAATTTTAAATAAGTTATTCTCCTGGCTTCATCAAATAAAGAGTCGAAT 180 Query 23141 GATGTTGGCGAAATCACATCGTCACCCATTGGATTGTTTATTTGTATGCCAAGAGAGTTA 23200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GATGTTGGCGAAATCACATCGTCACCCATTGGATTGTTTATTTGTATGCCAAGAGAGTTA 240 Query 23201 CAGCAGTTATACATTCTGCCATAGATTATAGCTAAGGCATGTAATAATTCGTAATCTTTT 23260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CAGCAGTTATACATTCTGCCATAGATTATAGCTAAGGCATGTAATAATTCGTAATCTTTT 300 Query 23261 AGCGTATTAGCGACCCATCGTCTTTCTGATTTAATAATAGATGATTCAGTTAAATATGAA 23320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AGCGTATTAGCGACCCATCGTCTTTCTGATTTAATAATAGATGATTCAGTTAAATATGAA 360 Query 23321 GGTAATTTCTTTTGTGCAAGTCTGACTAACTTTTTTATACCAATGTTTAACATACTTTCA 23380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GGTAATTTCTTTTGTGCAAGTCTGACTAACTTTTTTATACCAATGTTTAACATACTTTCA 420 Query 23381 TTTGTAATAAACTCAATGTCATTTTCTTCAATGTAAGATGAAATAAGAGTAGCCTTTGCC 23440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTTGTAATAAACTCAATGTCATTTTCTTCAATGTAAGATGAAATAAGAGTAGCCTTTGCC 480 Query 23441 TCGCTATACATTTCTAAATCGCCTTGTTTTTCTATCGTATTGCGAGAATTTTTAGCCCAA 23500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TCGCTATACATTTCTAAATCGCCTTGTTTTTCTATCGTATTGCGAGAATTTTTAGCCCAA 540 Query 23501 GCCATTAATGGATCATTTTTCCATTTTTCAATAACATTATTGTTATACCAAATGTCATAT 23560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GCCATTAATGGATCATTTTTCCATTTTTCAATAACATTATTGTTATACCAAATGTCATAT 600 Query 23561 CCTATAATCTGGtttttgtttttttGAATAATAAATGTTACTGTTCTTGCGGTTTGGAGG 23620 ||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||| Sbjct 601 CCTATAATCTGGTTTATGTCTTCTTGAATAATAAATGTTACTGTTCTTGCGGTTTGGAGG 660 Query 23621 AATTGATTCAAATTCAAGCGAAATAATTCAGGGTCAAAATATGTATCAATGCAGCATTTG 23680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 AATTGATTCAAATTCAAGCGAAATAATTCAGGGTCAAAATATGTATCAATGCAGCATTTG 720 Query 23681 AGCAAGT 23687 ||||||| Sbjct 721 AGCAAGT 727 Score = 1068 bits (1184), Expect = 0.0 Identities = 606/610 (99%), Gaps = 4/610 (1%) Strand=Plus/Plus Query 24363 ATACATAACTCTTTTCCAATAATTGGGGAAGTCATTCAAATCTATAATAGGTTTCAGATT 24422 |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| Sbjct 9306 ATACATAACTCTTTTCCAATAATTGGGGAA-TCATTCAA-TCTATAATAG-TTTCAGATT 9362 Query 24423 TGCTTCAATAAATTCTGACTGTAGCTGCTGAAACGTTGCGGTTGAACTATATTTCCTTAT 24482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9363 TGCTTCAATAAATTCTGACTGTAGCTGCTGAAACGTTGCGGTTGAACTATATTTCCTTAT 9422 Query 24483 AACTTTTACGAAAGAGTTTCTTTGAGTAATCACTTCACTCAAGTGCTTCCCTGCCTCCAA 24542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9423 AACTTTTACGAAAGAGTTTCTTTGAGTAATCACTTCACTCAAGTGCTTCCCTGCCTCCAA 9482 Query 24543 ACGATACCTGTTAGCAATATTTAATAGCTTGAAATGATGAAGAGCTCTGTGTTTGTCTTC 24602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9483 ACGATACCTGTTAGCAATATTTAATAGCTTGAAATGATGAAGAGCTCTGTGTTTGTCTTC 9542 Query 24603 CTGCCTCCAGTTCGCCGGGCATTCAACATAAAAACTGATAGCACCCGGAGTTCCGGAAAC 24662 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9543 CTGCCTCCAGTTCGCCGGGCATTCAACATAAAAACTGATAGCACCCGGAGTTCCGGAAAC 9602 Query 24663 GAAATTTGCATATACCCATTGCTCACGaaaaaaaaTGTCCTTGTCGATATAGGGATGAAT 24722 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9603 GAAATTTGCATATACCCATTGCTCACGAAAAAAAATGTCCTTGTCGATATAGGGATGAAT 9662 Query 24723 CGCTTGGTGTACCTCATCTACTGCGAAAACTTGACCTTTCTCTCCCATATTGCAGTCGCG 24782 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9663 CGCTTGGTGTACCTCATCTACTGCGAAAACTTGACCTTTCTCTCCCATATTGCAGTCGCG 9722 Query 24783 GCACGATGGAACTAAATTAATAGGCATCACCGAAAATTCAGGATAATGTGCAATAGGAAG 24842 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9723 GCACGATGGAACTAAATTAATAGGCATCACCGAAAATTCAGGATAATGTGCAATAGGAAG 9782 Query 24843 AAAATGATCTATATTTTTTGTCTGTCCTATATCACCACAAAATGGACATTTTTCACCTGA 24902 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9783 AAAATGATCTATATTTTTTGTCTGTCCTATATCACCACAAAATGGACATTTTTCACCTGA 9842 Query 24903 TGAAACAAGCATGTCATCGTAATATGTTCTAGCGGGTTTGTTTTTATCTCGGAGATTATT 24962 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 9843 TGAAACAAGCATGTCATCGTAATATGTTCTAGCGGGTTTGTTTTTATCTCGGAG-TTATT 9901 Query 24963 TTCATAAAGC 24972 |||||||||| Sbjct 9902 TTCATAAAGC 9911 >seq1770 Length=9848 Score = 1173 bits (1300), Expect = 0.0 Identities = 659/665 (99%), Gaps = 0/665 (0%) Strand=Plus/Plus Query 24974 TTTCTAATTTAACCTTTGTCAGGTTACCAACTACTAAGGTTGTAGGCTCAAGAGGGTGTG 25033 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 5 TTTCTAATTTAGCCGTTATCAGGTTACCAACTACTAAGGTTGTAGGCTCAAGAGGGTGTG 64 Query 25034 TCCTGTCGTAGGTAAATAACTGACCTGTCGAGCTTAATATTCTATATTGTTGTTCTTTCT 25093 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 65 TCCTGTCGTAGGTAAATAACTGACCTGTCGAGCTTAATATACTATATTGTTGTTCTTTCT 124 Query 25094 GCAAAAAAGTGGGGAAGTGAGTAATGAAATTATTTCTAACATTTATCTGCATCATACCTT 25153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 GCAAAAAAGTGGGGAAGTGAGTAATGAAATTATTTCTAACATTTATCTGCATCATACCTT 184 Query 25154 CCGAGCATTTATTAAGCATTTCGCTATAAGTTCTCGCTGGAAGAGGTAGTTTTTTCATTG 25213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 185 CCGAGCATTTATTAAGCATTTCGCTATAAGTTCTCGCTGGAAGAGGTAGTTTTTTCATTG 244 Query 25214 TACTTTACCTTCATCTCTGTTCATTATCATCGCTTTTAAAACGGTTCGACCTTCTAATCC 25273 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 245 TACTTTACCTTCATCTCTGTTCATTATCATCGCTTTTATAACGGTTCGACCTTCTAATCC 304 Query 25274 TATCTGACCATTATAATTTTTTAGAATGGTTTCATAAGAAAGCTCTGAATCAACGGACTG 25333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305 TATCTGACCATTATAATTTTTTAGAATGGTTTCATAAGAAAGCTCTGAATCAACGGACTG 364 Query 25334 CGATAATAAGTGGTGGTATCCAGAATTTGTCACTTCAAGTAAAAACACCTCACGAGTTAA 25393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 365 CGATAATAAGTGGTGGTATCCAGAATTTGTCACTTCAAGTAAAAACACCTCACGAGTTAA 424 Query 25394 AACACCTAAGTTCTCACCGAATGTCTCAATATCCGGACGGATAATATTTATTGCTTCTCT 25453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 425 AACACCTAAGTTCTCACCGAATGTCTCAATATCCGGACGGATAATATTTATTGCTTCTCT 484 Query 25454 TGACCGTAGGACTTTCCACACGCAGGATTTTGGAACCTCTTGCAGTACTACTGGGGAATG 25513 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 485 TGACCGTAGGACTTTCCACATGCAGGATTTTGGAACCTCTTGCAGTACTACTGGGGAATG 544 Query 25514 AGTTGCAATTATTGCTACACCATTGCGTGCATCGAGTAAGTCGCTTAATGTTCGTAAAAA 25573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 545 AGTTGCAATTATTGCTACACCATTGCGTGCATCGAGTAAGTCGCTTAATGTTCGTAAAAA 604 Query 25574 AGCAGAGAGCAAAGGTGGATGCAGATGAACCTCTGGTTCATCGAATAAAACTAATGACTT 25633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 605 AGCAGAGAGCAAAGGTGGATGCAGATGAACCTCTGGTTCATCGAATAAAACTAATGACTT 664 Query 25634 TTCGC 25638 ||||| Sbjct 665 TTCGC 669 Score = 1162 bits (1288), Expect = 0.0 Identities = 647/649 (99%), Gaps = 0/649 (0%) Strand=Plus/Plus Query 26647 CACCATGCTCATCAAAGACAGTAAGATAAAACATTGTAACAAAGGAATAGTCATTCCAAC 26706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9199 CACCATGCTCATCAAAGACAGTAAGATAAAACATTGTAACAAAGGAATAGTCATTCCAAC 9258 Query 26707 CATCTGCTCGTAGGAATGCCTTAtttttttCTACTGCAGGAATATACCCGCCTCTTTCAA 26766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9259 CATCTGCTCGTAGGAATGCCTTATTTTTTTCTACTGCAGGAATATACCCGCCTCTTTCAA 9318 Query 26767 TAACACTAAACTCCAACATATAGTAACCCTTAATTTTATTAAAATAACCGCAATTTATTT 26826 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 9319 TAACACTAAACTCCAACATATAGTAACCCGTAATTTTATTAAAATAACCGCAATTTATTT 9378 Query 26827 GGCGGCAACACAGGATCTCTCTTTTAAGTTACTCTCTATTACATACGTTTTCCATCTAAA 26886 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 9379 GGCGGCAACACAGGATCTCTCTTTTAAGTTACTCTCTATGACATACGTTTTCCATCTAAA 9438 Query 26887 AATTAGTAGTATTGAACTTAACGGGGCATCGTATTGTAGTTTTCCATATTTAGCTTTCTG 26946 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9439 AATTAGTAGTATTGAACTTAACGGGGCATCGTATTGTAGTTTTCCATATTTAGCTTTCTG 9498 Query 26947 CTTCCTTTTGGATAACCCACTGTTATTCATGTTGCATGGTGCACTGTTTATACCAACGAT 27006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9499 CTTCCTTTTGGATAACCCACTGTTATTCATGTTGCATGGTGCACTGTTTATACCAACGAT 9558 Query 27007 ATAGTCTATTAATGCATATATAGTATCGCCGAACGATTAGCTCTTCAGGCTTCTGAAGAA 27066 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9559 ATAGTCTATTAATGCATATATAGTATCGCCGAACGATTAGCTCTTCAGGCTTCTGAAGAA 9618 Query 27067 GCGTTTCAAGTACTAATAAGCCGATAGATAGCCACGGACTTCGTAGCCATTTTTCATAAG 27126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9619 GCGTTTCAAGTACTAATAAGCCGATAGATAGCCACGGACTTCGTAGCCATTTTTCATAAG 9678 Query 27127 TGTTAACTTCCGCTCCTCGCTCATAACAGACATTCACTACAGTTATGGCGGAAAGGTATG 27186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9679 TGTTAACTTCCGCTCCTCGCTCATAACAGACATTCACTACAGTTATGGCGGAAAGGTATG 9738 Query 27187 CATGCTGGGTGTGGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACT 27246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9739 CATGCTGGGTGTGGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACT 9798 Query 27247 GCTATCTTCTTACTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 27295 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9799 GCTATCTTCTTACTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 9847 >seq21284 Length=642 Score = 159 bits (176), Expect = 1e-34 Identities = 235/328 (72%), Gaps = 6/328 (2%) Strand=Plus/Minus Query 35533 TGCAGTTTCCATTGATTGGCACGAGAGGCCATGCAGGATTAAGTCCCTTGAGGTATTTAT 35592 ||||||| || ||||| || | || ||||| |||||| || || || ||||| || | Sbjct 642 TGCAGTTCCCGTTGATAGGAGTCATAGCCCATGAAGGATTCAGGCCTTTCAGGTACTTCT 583 Query 35593 TTCCGCCGTCGATTATCAGCTTCTTGAATGTTGCTTCGTTAGAGTCAGAAAGTTTTGCTA 35652 ||||| || || | ||| ||||||| |||||||||||| | ||||| ||||| |||| Sbjct 582 GACCGCCATCTATGACCAGTTTCTTGACTGTTGCTTCGTTCGCGTCAGTCAGTTTGGCTA 523 Query 35653 TGACCAAGCTGCCGTTGATCGCCTCCCTTCCGGTATCGA-AAAGAACGAATGTTCCCTCT 35711 || | ||| || || | | ||| | ||| ||||| | | | | ||| || || Sbjct 522 CAACAAGGCTTCCATTCACTGGCTCGCGTCCAGTATCTACTGACACCATATG-ACCTTCA 464 Query 35712 GGAATGCTTAACCCAACCGGTGCCGTCATTGAATCACCTTCCACTTTAAGCCAGAACGCA 35771 || |||||| || || |||| ||||| ||||||||||| || || |||||||| || Sbjct 463 GGGATGCTTTGACCTACAGGTGAGGTCATGGAATCACCTTCAACCTTCAGCCAGAATCCA 404 Query 35772 TTACCTTGAATA--TGCGCGTCAGACTCAAGCCAAACATCTATGTCTTTAATGGTGTATG 35829 || ||| |||| | ||||| ||| ||| |||| ||||| || || ||| | Sbjct 403 TTGCCT--AATAAGTTAACGTCACTGTCATACCATTCATCAATGTCCTTGATATCGTAGG 346 Query 35830 GTTCGCATGCTTCACACCACGAGCCAGC 35857 |||| || |||||||||||||| ||||| Sbjct 345 GTTCACAAGCTTCACACCACGAACCAGC 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150488689199112