Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_019767.1 Length=40155 Score E Sequences producing significant alignments: (Bits) Value seq18029 1094 0.0 seq2164 233 5e-57 >seq18029 Length=622 Score = 1094 bits (1212), Expect = 0.0 Identities = 617/623 (99%), Gaps = 1/623 (0%) Strand=Plus/Plus Query 29046 GCTCAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTC 29105 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1 GCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGG-TACTCATACTCACTTC 59 Query 29106 TAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAG 29165 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 60 TAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATATCTCTGGCGATTGAAG 119 Query 29166 GGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCAT 29225 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 120 GGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCAT 179 Query 29226 TTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGT 29285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 TTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGT 239 Query 29286 CTGCGACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATTGCTTTAA 29345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CTGCGACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTAA 299 Query 29346 GGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATAGTTTCTTTTTTGTGCTCATACGTT 29405 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 300 GGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGTT 359 Query 29406 AAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTG 29465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 AAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTG 419 Query 29466 GCGGTGATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAG 29525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GCGGTGATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAG 479 Query 29526 ATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCTCGGCGTATATCAAAGCG 29585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 ATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCTCGGCGTATATCAAAGCG 539 Query 29586 CGATCAACAAGGCCATTCATGCAGGCCGAAAGAtttttttAACTATAAACGCTGATGGAA 29645 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 CGATCAACAAGGCCCTTCATGCAGGCCGAAAGATTTTTTTAACTATAAACGCTGATGGAA 599 Query 29646 GCGTTTATGCGGAAGAGGTAAAG 29668 ||||||||||||||||||||||| Sbjct 600 GCGTTTATGCGGAAGAGGTAAAG 622 >seq2164 Length=289 Score = 233 bits (258), Expect = 5e-57 Identities = 129/129 (100%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 28920 AGCTTGGCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATG 28979 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 AGCTTGGCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATG 61 Query 28980 CAGAATCACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGG 29039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 CAGAATCACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGG 121 Query 29040 TTCTAAGCT 29048 ||||||||| Sbjct 122 TTCTAAGCT 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128308143003502