Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq18029 1079 0.0 seq2164 233 5e-57 >seq18029 Length=622 Score = 1079 bits (1196), Expect = 0.0 Identities = 614/623 (99%), Gaps = 1/623 (0%) Strand=Plus/Plus Query 27530 GCTCAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTC 27589 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1 GCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGG-TACTCATACTCACTTC 59 Query 27590 TAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAG 27649 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 60 TAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATATCTCTGGCGATTGAAG 119 Query 27650 GGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCAT 27709 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 120 GGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCAT 179 Query 27710 TTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGT 27769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 TTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGT 239 Query 27770 CTGCGACAGATTCCTGGGGTAAGCCAAGTTCAtttttctttttttCATAAATTGCTTTAA 27829 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CTGCGACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTAA 299 Query 27830 GGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGTT 27889 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 300 GGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGTT 359 Query 27890 AAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTA 27949 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 AAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTG 419 Query 27950 GCGGTGATAATAGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAG 28009 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GCGGTGATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAG 479 Query 28010 ATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCTCGGCGTATATCAAAGCG 28069 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 ATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCTCGGCGTATATCAAAGCG 539 Query 28070 CGATCAACAAGGCCATTCATGCAGGCCGAAAGAtttttttAACTATAAACGCTGATGGAA 28129 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 CGATCAACAAGGCCCTTCATGCAGGCCGAAAGATTTTTTTAACTATAAACGCTGATGGAA 599 Query 28130 GCGTTTATGCGGAAGAGGTAAAG 28152 ||||||||||||||||||||||| Sbjct 600 GCGTTTATGCGGAAGAGGTAAAG 622 >seq2164 Length=289 Score = 233 bits (258), Expect = 5e-57 Identities = 129/129 (100%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 27404 AGCTTGGCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATG 27463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 AGCTTGGCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATG 61 Query 27464 CAGAATCACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGG 27523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 CAGAATCACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGG 121 Query 27524 TTCTAAGCT 27532 ||||||||| Sbjct 122 TTCTAAGCT 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124498910051956