Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_019934.1 Length=39012 Score E Sequences producing significant alignments: (Bits) Value seq21284 147 5e-31 >seq21284 Length=642 Score = 147 bits (162), Expect = 5e-31 Identities = 249/356 (70%), Gaps = 6/356 (2%) Strand=Plus/Plus Query 30778 GGAAATATCCAGTGATCAGCAGTGTGCAGGCAGGTTCTTGGTGTGAGGCTGTTGAAGCCT 30837 ||||||||||| |||| |||| || || ||||| |||||||| ||| |||| ||| Sbjct 289 GGAAATATCCATTGATTAGCATGGTTAGAGCTGGTTCGTGGTGTGAAGCTTGTGAACCCT 348 Query 30838 ACACCCTTAAAGACGTTGATCAATGGTTAGAGTCAGATGCTCA--TATTCAAGGCGACGG 30895 || | || ||| ||||| |||||| || || | | | |||| |||| | || Sbjct 349 ACGATATCAAGGACATTGATGAATGGTATGACAGTGACGTTAACTTATT--AGGCAATGG 406 Query 30896 TTTCTGGCTTCTTGTTGAGGGCGATTCGATGACATCTCCCGCCGGACTAAGCATTCCGGA 30955 |||||||| ||||| || ||||| ||||| || || | || | |||||| || || Sbjct 407 ATTCTGGCTGAAGGTTGAAGGTGATTCCATGACCTCACCTGTAGGTCAAAGCATCCCTGA 466 Query 30956 GGGTACTTATGTACTTT-TCGACACTGGCCGAGAACCGATTAACGGAAACTTGGTTGTTG 31014 ||| | |||| | | || ||||| || || || | || |||| | | ||||| | Sbjct 467 AGGT-CATATGGTGTCAGTAGATACTGGACGCGAGCCAGTGAATGGAAGCCTTGTTGTAG 525 Query 31015 CAAAGCTCACCGACTCCAACGAAGCAACCTTTAAAAAGCTGGTCATCGATAGCGGACATC 31074 | || || || ||| | ||||||||||| | || || |||||||| ||| |||| || Sbjct 526 CCAAACTGACTGACGCGAACGAAGCAACAGTCAAGAAACTGGTCATAGATGGCGGTCAGA 585 Query 31075 GCTATTTAAAAGGGCTTAATCCTGCCTGGCCAATGATTCCTATCAATGGAAATTGC 31130 || | ||||| || |||||| | ||| | |||| ||||||||| || || ||| Sbjct 586 AGTACCTGAAAGGCCTGAATCCTTCATGGGCTATGACTCCTATCAACGGGAACTGC 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124652430775444