Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq11118 149 1e-30 seq747 149 1e-30 seq8861 140 6e-28 seq5054 138 2e-27 seq466 134 2e-26 >seq11118 Length=575 Score = 149 bits (164), Expect = 1e-30 Identities = 361/544 (66%), Gaps = 12/544 (2%) Strand=Plus/Minus Query 73797 atattaaaaatataataaaagatactgttaatgatatttccacatatatagttaataata 73856 |||||||| | ||||| || ||||| | ||||| | | | |||| || ||| Sbjct 538 ATATTAAAGAATTAATACAAAATACTATAGATGATGTAGTGTCTTTTATAACTAGATATA 479 Query 73857 atCTAGAAAAATTATATCAAAGAATGTATTGTNNNNNNNNNNTTTTAAACTGTTTTTACG 73916 | || || ||||||||||||||||| |||| ||||| | |||| ||| Sbjct 478 AATTATCAAGATTATATCAAAGAATGTTTTGTTTATGTTATTTTTTACATTGTTATTATA 419 Query 73917 AGaaaatatttaaaaa--tatacctattgaaacat--atgataaaattatatatcaaaat 73972 | | ||||| | | || | ||| || || || || ||| |||| |||| Sbjct 418 TTAGATTATTTGATACATTAAATGTATATGAATATCCATTATTAAAATATA---CAAATA 362 Query 73973 accataaatattaatGAAGTAGTGCATCAAAAATATGAATATTATGAATGCCAACACGTA 74032 | ||||| || |||| | | || |||||||||| ||| |||| | Sbjct 361 ATTTTAAATTATA-TGAACCTATTAAACATGTATATGAATATATACCATGTAAACATATT 303 Query 74033 CAAGAATATAAAAAAGTATTTAAAGATGTTGAAAATTTCTATTCAAATACTAATAAATTT 74092 | || ||||| | ||||||||||| || | ||||| | | || |||| ||| Sbjct 302 GATGATTATAATATGGTATTTAAAGAAGTAAATAATTTTTTTAATAACTATAATGCGTTT 243 Query 74093 TTAGAAAATTTTATA--AATATCGTAAATAAAGTAGCAATATGTAAAATATGCGGAGAAT 74150 | || || | |||| | | || |||||| ||||||||||||||||||| || |||| Sbjct 242 ATTGATAAATATATATCATTTTC--AAATAATTTAGCAATATGTAAAATATGTGGTGAAT 185 Query 74151 CATTGGATATGTTTAATTTTGAAGAAGCGAATTACATACAATCTAAAGGAGAAATAATAA 74210 | | |||||||||||||| | ||||| ||||| || ||||| | || | || || | Sbjct 184 CTATTGATATGTTTAATTTCGTTGAAGCAAATTATATTCAATCACATGGTTATATGATTA 125 Query 74211 TTACTACAAATAGAGAAAATATTTTTCAAAATGAAACATATTCTAGGTTAATAAATGCTG 74270 | |||||| || ||| ||||| |||||| ||||| ||| || |||| ||||||| Sbjct 124 TAACTACACCTAAAGATAATATATTTCAATATGAAGTTTATGGTAAATTAACTAATGCTG 65 Query 74271 AATTATTTTTAACTGATATTATAAGCGTTTTTGATGATATTTTTGATACAAATAGAATGG 74330 ||||||||||| | ||| ||| || ||||| | ||| |||| ||| ||||| Sbjct 64 AATTATTTTTATCAGATTATATTTCAAATTATGATGCATTATTTAATACTAATTTAATGG 5 Query 74331 ACGA 74334 | || Sbjct 4 ATGA 1 >seq747 Length=8313734 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||||| || | ||||| ||| | |||| ||||| |||||| || ||| Sbjct 5399491 ATTCCACCTCTCAGACGTAATACCAAATGGAGAGTAGATTCTTTTTGAATATTGTAATCG 5399550 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | || || | |||||| || || ||||| | || ||| ||||| ||| Sbjct 5399551 GATAATGTCCGTCCGTCTTCAAGTTGTTTCCCAGCGAAAATCAGTCGCTGCTGATCTGGA 5399610 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| ||||| | ||||| |||| || || ||||| | || Sbjct 5399611 GGAATGCCCTCTTTGTCTTGAATTTTTGCTTTTACATTTTCTATGGTGTCGGATGCTTCG 5399670 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||| ||||| |||||||| || || ||||||||||| || ||||| Sbjct 5399671 ACTTCTAATGTTATGGTTTTACCAGTGAGAGTTTTTACAAAAATCTGCAT 5399720 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | || | |||| ||||| |||| ||||| || || ||||| Sbjct 5397895 ATTCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5397954 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | | ||| || | ||||| || ||||| || |||| ||| ||||| || Sbjct 5397955 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5398014 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| || || || |||| ||| | |||| || || || || | ||| Sbjct 5398015 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCTATGGTGTCAGATGCTTCA 5398074 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || |||||||| || || ||||| ||||| |||||||| Sbjct 5398075 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATTTGCAT 5398124 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | || | |||| ||||| |||| ||||| || || ||||| Sbjct 5398351 ATTCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5398410 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | | ||| || | ||||| || ||||| || |||| ||| ||||| || Sbjct 5398411 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5398470 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| || || || |||| ||| | |||| || || || || | ||| Sbjct 5398471 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCTATGGTGTCAGATGCTTCA 5398530 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || |||||||| || || ||||| ||||| |||||||| Sbjct 5398531 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATTTGCAT 5398580 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| | || | |||| ||||| |||| ||||| || || Sbjct 5397432 AATTTGCATGCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTT 5397491 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| ||||| || | | ||| || | ||||| || ||||| || |||| ||| || Sbjct 5397492 GTAGTCAGATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTG 5397551 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || ||||| ||||| || || || |||| ||| | ||| || || || || Sbjct 5397552 ATCTGGGGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTCTCTATGGTGTCAGA 5397611 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||||||||| || || |||||||| || || ||||| ||||| |||||||| Sbjct 5397612 TGCTTCAACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATTTGCAT 5397668 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | || | |||| ||||| |||| ||||| || || ||||| Sbjct 5398807 ATTCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5398866 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | | ||| || | ||||| || ||||| || |||| ||| ||||| || Sbjct 5398867 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5398926 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| || || || |||| ||| | |||| || || || || | ||| Sbjct 5398927 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCAGATGCTTCA 5398986 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || |||||||| || || ||||| ||||| || ||||| Sbjct 5398987 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCAT 5399036 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | || | |||| ||||| |||| ||||| || || ||||| Sbjct 5399263 ATGCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5399322 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || | ||||| || ||||| || |||| ||| ||||| || Sbjct 5399323 GATAATGTACGGCCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5399382 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| || || || |||| ||| | ||| ||| || || || | ||| Sbjct 5399383 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTCTCAATGGTGTCAGATGCTTCA 5399442 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||||||| || || |||||||| || || ||||| ||||| || |||||| Sbjct 5399443 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCATT 5399493 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || ||||| ||||| | ||| | ||||| ||| || ||||| || || || | Sbjct 4903430 CGCAGTACAAGATGGAGTGTGGATTCTTTTTGAATGTTGTAGTCTGACAAGGTGCGTCCG 4903371 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || || || ||||| || | | ||||||||||||||| ||||||||||| Sbjct 4903370 TCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGATCAGGAGGAATTCCTTCTTTG 4903311 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | || | ||| ||| || || |||| ||| ||||||| ||| || Sbjct 4903310 TCTTGGATCTTCGCCTTCACATTCTCAATTGTGTCCGAAGGCTCCACTTCTAAAGTGATG 4903251 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| ||||| ||||| || ||||| Sbjct 4903250 GTCTTGCCGGTTAGAGTTTTCACAAAGATCTGCAT 4903216 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | || || | |||| |||| |||| ||||| || || |||||| Sbjct 5399035 ATGCCACCACGCAGTCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATGTTGTAGTCG 5399094 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| || | ||| || | ||||| || ||||| || || | ||| ||||| ||| Sbjct 5399095 GATAGTGTACGGCCATCTTCAAGCTGTTTGCCCGCAAAGATCAACCGCTGCTGATCCGGA 5399154 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| || || || || | ||| | ||| ||| || || || | ||| Sbjct 5399155 GGAATTCCCTCTTTGTCCTGAATCTTTGCTTTCACATTCTCAATGGTGTCAGATGCTTCA 5399214 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || |||||||| || || ||||| ||||| || ||||| Sbjct 5399215 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCAT 5399264 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 || ||| || || |||| | || | || | ||| | ||||| || || |||||| Sbjct 4903680 AAATTACATTCCTCCTCGTAGACGTAACACTAAATGGAGTGTAGATTCCTTTTGAATATT 4903621 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || || | || || | || || || ||||| || | | |||||| Sbjct 4903620 GTAGTCTGACAAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTG 4903561 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| ||||||||||| ||||| || || | || | || || || || || Sbjct 4903560 ATCAGGAGGAATTCCTTCTTTGTCTTGGATCTTCGCCTTCACGTTCTCGATTGTGTCCGA 4903501 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | ||| || || || || || || ||||| || || || ||||| Sbjct 4903500 AGCTTCTACTTCCAAAGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAGATCTGCAT 4903444 >seq8861 Length=554 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | || || |||| ||||| |||| ||||| || || ||||| Sbjct 239 ATTCCACCTCTGAGACGTAGCACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 298 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | | ||| || | ||||| || |||||||| |||| ||| ||||| || Sbjct 299 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGG 358 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| || || || |||| ||| | |||| || || || || | ||| Sbjct 359 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCTATGGTGTCAGATGCTTCA 418 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || |||||||| || || ||||| ||||| || ||||| Sbjct 419 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCAT 468 >seq5054 Length=501 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||| | || ||||| | |||| |||| ||||| |||||| Sbjct 443 ATTTGCATACCTCCTCGAAGACGTAGTACTAAGTGCAGGGTAGATTCTTTCTGAATATTG 384 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| ||||| || | ||| || ||||| || || || || || | ||||||||| Sbjct 383 TAGTCTGATAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGG 324 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || ||||| || || || ||||| | ||| | |||| ||| ||||| ||| Sbjct 323 TCTGGAGGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACATTTTCAATTGTATCTGAA 264 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||| || || || || || || || ||||| ||||||||||| || ||||| Sbjct 263 GCTTCAACCTCAAGGGTGATTGTCTTGCCAGTTAGAGTTTTTACAAAGATCTGCAT 208 >seq466 Length=1632705 Score = 134 bits (148), Expect = 2e-26 Identities = 183/254 (72%), Gaps = 1/254 (0%) Strand=Plus/Plus Query 193124 AATTTATAT-ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATAT 193182 ||||||||| ||| ||||| | || | ||||| || | ||| | ||||| || | Sbjct 1583272 AATTTATATTACCTCCTCTAAGTCTCAAAACCAGGTGAAGTGTGGATTCTTTCTGGATGT 1583331 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 ||||||| || | || | ||| ||||||||||| |||||||| || | | |||| Sbjct 1583332 TATAGTCTGAAAGAGTGCGGCCATCTTCTAATTGTTTCCCGGCAAAGATGAGACGTTGTT 1583391 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 | || ||||| || ||||| || ||||| ||||| | ||| | |||| ||||| |||| Sbjct 1583392 GGTCTGGAGGAATACCTTCCTTGTCTTGGATTTTAGCTTTGACATTTTCGATAGTGTCGG 1583451 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTT 193362 ||| || || || | || || || || || || || ||||| || |||||||||||| Sbjct 1583452 AAGCTTCCACCTCCAATGTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATTTGCATTG 1583511 Query 193363 TATTAGTAAAATAA 193376 | || |||||||| Sbjct 1583512 TGTTGCTAAAATAA 1583525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899165629010160