Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq11118 176 8e-39 seq747 163 5e-35 seq5054 140 6e-28 seq8861 127 4e-24 seq483 102 1e-16 seq5052 84.2 4e-11 >seq11118 Length=575 Score = 176 bits (194), Expect = 8e-39 Identities = 245/340 (72%), Gaps = 5/340 (1%) Strand=Plus/Minus Query 72113 TAAACA---ATACGAATATTATGAATGTCAACATGTGCAAGAATATAAAAAAGTATTTAA 72169 |||||| ||| |||||| |||| ||||| | | || ||||| | |||||||| Sbjct 339 TAAACATGTATATGAATATATACCATGTAAACATATTGATGATTATAATATGGTATTTAA 280 Query 72170 AAATGTAGAAAATTTCTATTCTAATACTAATAAATTTTTAGAAACTTATATTAATATAGT 72229 | | ||| | ||||| | | ||| |||| ||| | || | ||||| | || | Sbjct 279 AGAAGTAAATAATTTTTTTAATAACTATAATGCGTTTATTGATAAATATAT-ATCATTTT 221 Query 72230 TAA-TAAAATAGCTATATGCAAAATATGTGGTGAGTCATTAGATATGTTTAATTTTGAAG 72288 || ||| |||| ||||| |||||||||||||| || | |||||||||||||| | | Sbjct 220 CAAATAATTTAGCAATATGTAAAATATGTGGTGAATCTATTGATATGTTTAATTTCGTTG 161 Query 72289 AGGCCAATTATATTCAATCTAAAGGTGAAATTATTATTACAACAAACAAAGAAAATATTT 72348 | || |||||||||||||| | ||| | || ||||| || ||| ||||| ||||| | Sbjct 160 AAGCAAATTATATTCAATCACATGGTTATATGATTATAACTACACCTAAAGATAATATAT 101 Query 72349 TTCAATATGACACATATTCGAGTTTAATTAATGCAGAATTATTCTTAACAGATATTATTG 72408 |||||||||| ||| | |||| |||||| |||||||| ||| ||||| |||| Sbjct 100 TTCAATATGAAGTTTATGGTAAATTAACTAATGCTGAATTATTTTTATCAGATTATATTT 41 Query 72409 GTATATATGATGATATATTTAATACTAATAGAATGGATGA 72448 | ||||||| |||||||||||||| ||||||||| Sbjct 40 CAAATTATGATGCATTATTTAATACTAATTTAATGGATGA 1 >seq747 Length=8313734 Score = 163 bits (180), Expect = 5e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || |||||||| ||||| | ||||| ||||| |||||| ||||| Sbjct 5399491 ATTCCACCTCTCAGACGTAATACCAAATGGAGAGTAGATTCTTTTTGAATATTGTAATCG 5399550 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | ||| |||| || | |||||| ||||| ||||| | || ||| || || || Sbjct 5399551 GATAATGTCCGTCCGTCTTCAAGTTGTTTCCCAGCGAAAATCAGTCGCTGCTGATCTGGA 5399610 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| ||||| ||||||||| ||| || || || | ||| Sbjct 5399611 GGAATGCCCTCTTTGTCTTGAATTTTTGCTTTTACATTTTCTATGGTGTCGGATGCTTCG 5399670 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || |||||||||||||| | ||||| | || |||||||| Sbjct 5399671 ACTTCTAATGTTATGGTTTTACCAGTGAGAGTTTTTACAAAAATCTGCAT 5399720 Score = 123 bits (136), Expect = 5e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || ||||| || ||||| | ||||| ||||| || || || || Sbjct 5399263 ATGCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5399322 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || ||||| || |||| ||| || || || Sbjct 5399323 GATAATGTACGGCCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5399382 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 5399383 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTCTCAATGGTGTCAGATGCTTCA 5399442 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 |||||||| || ||||||||||| || | |||||| | || ||||||||| Sbjct 5399443 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCATT 5399493 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| || ||||| |||||||| | |||| || || |||||| || ||| Sbjct 4903673 ATTCCTCCTCGTAGACGTAACACTAAATGGAGTGTAGATTCCTTTTGAATATTGTAGTCT 4903614 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| |||| |||| || || |||||||| || | | |||||| ||||| Sbjct 4903613 GACAAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGATCAGGA 4903554 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| || || || || || || || || || | |||| Sbjct 4903553 GGAATTCCTTCTTTGTCTTGGATCTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCTTCT 4903494 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||| ||||| || || || | ||||| | ||| |||||||| Sbjct 4903493 ACTTCCAAAGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAGATCTGCAT 4903444 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || ||||| || ||||| | ||||| ||||| || || || || Sbjct 5397439 ATGCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5397498 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || ||||| || |||| ||| || || || Sbjct 5397499 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5397558 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| ||| || || || | ||| Sbjct 5397559 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTCTCTATGGTGTCAGATGCTTCA 5397618 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || ||||||||||| || | |||||| | || || ||||| Sbjct 5397619 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATTTGCAT 5397668 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || ||||| || ||||| | ||||| ||||| || || || || Sbjct 5397895 ATTCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5397954 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || ||||| || |||| ||| || || || Sbjct 5397955 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5398014 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| ||| || || || | ||| Sbjct 5398015 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCTATGGTGTCAGATGCTTCA 5398074 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || ||||||||||| || | |||||| | || || ||||| Sbjct 5398075 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATTTGCAT 5398124 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || ||||| || ||||| | ||||| ||||| || || || || Sbjct 5398351 ATTCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5398410 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || ||||| || |||| ||| || || || Sbjct 5398411 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5398470 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| ||| || || || | ||| Sbjct 5398471 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCTATGGTGTCAGATGCTTCA 5398530 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || ||||||||||| || | |||||| | || || ||||| Sbjct 5398531 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATTTGCAT 5398580 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || ||||| || ||||| | ||||| ||||| || || || || Sbjct 5398807 ATTCCACCTCTGAGACGTAACACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5398866 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || ||||| || |||| ||| || || || Sbjct 5398867 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCTGGG 5398926 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 5398927 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCAGATGCTTCA 5398986 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || ||||||||||| || | |||||| | || |||||||| Sbjct 5398987 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCAT 5399036 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| || || ||||| | ||||| ||||| || || || || Sbjct 5397667 ATGCCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5397726 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| ||||||||||| |||| ||| || || || Sbjct 5397727 GATAATGTACGACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGG 5397786 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 5397787 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCAGATGCTTCA 5397846 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || ||||||||||| || | |||||| | || ||||||||| Sbjct 5397847 ACTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCATT 5397897 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| || || ||||| | ||||| ||||| || || || || Sbjct 5398123 ATGCCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5398182 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || |||||||| |||| ||| || || || Sbjct 5398183 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGG 5398242 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 5398243 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCAGATGCTTCA 5398302 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || ||||||||||| || | |||||| | || ||||||||| Sbjct 5398303 ACTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCATT 5398353 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| || || ||||| | ||||| ||||| || || || || Sbjct 5398579 ATGCCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5398638 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || |||||||| |||| ||| || || || Sbjct 5398639 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGG 5398698 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 5398699 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCAGATGCTTCA 5398758 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || ||||||||||| || | |||||| | || ||||||||| Sbjct 5398759 ACTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCATT 5398809 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || | ||| || | ||| | ||| | || | ||||| ||| || || ||| Sbjct 4903445 ATGCCTCCACGAAGACGCAGTACAAGATGGAGTGTGGATTCTTTTTGAATGTTGTAGTCT 4903386 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| |||| |||| || || |||||||| || | | |||||| ||||| Sbjct 4903385 GACAAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGATCAGGA 4903326 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| || || || ||||| || || || || | || Sbjct 4903325 GGAATTCCTTCTTTGTCTTGGATCTTCGCCTTCACATTCTCAATTGTGTCCGAAGGCTCC 4903266 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||| ||||| || || |||| ||||| | || |||||||| Sbjct 4903265 ACTTCTAAAGTGATGGTCTTGCCGGTTAGAGTTTTCACAAAGATCTGCAT 4903216 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| || || ||||||||||||| ||||| || || || || Sbjct 5396983 ATGCCACCACGGAGTCTCAAAACCAAATGTAAAGTAGATTCTTTCTGGATGTTGTAGTCA 5397042 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || || | ||||| || ||||| || |||| ||| || || || Sbjct 5397043 GATAGTGTACGGCCATCTTCAAGCTGTTTGCCCGCAAAGATCAATCGCTGCTGATCCGGA 5397102 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 5397103 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCAGATGCTTCA 5397162 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || ||||||||||| || | |||||| | || |||||||| Sbjct 5397163 ACTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTGACAAAGATCTGCAT 5397212 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| || || ||||| | ||||| ||||| || || || || Sbjct 5397211 ATGCCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 5397270 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || |||| || | ||||| || ||||| || |||| ||| || || || Sbjct 5397271 GATAGTGTACGGCCGTCTTCAAGCTGTTTGCCTGCAAAGATCAATCGCTGCTGATCCGGA 5397330 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| |||||||| || || || ||| ||||| || || || || | ||| Sbjct 5397331 GGAATTCCCTCTTTATCCTGAATCTTGGCTTTCACATTTTCAATGGTGTCAGATGCTTCA 5397390 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || ||||||||||| || | |||||| | || || ||||| Sbjct 5397391 ACTTCTAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAAATTTGCAT 5397440 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| || || || || | ||||| ||||| || || || || Sbjct 5399035 ATGCCACCACGCAGTCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATGTTGTAGTCG 5399094 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || || | ||||| || ||||| || || | ||| || || || Sbjct 5399095 GATAGTGTACGGCCATCTTCAAGCTGTTTGCCCGCAAAGATCAACCGCTGCTGATCCGGA 5399154 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 5399155 GGAATTCCCTCTTTGTCCTGAATCTTTGCTTTCACATTCTCAATGGTGTCAGATGCTTCA 5399214 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || ||||||||||| || | |||||| | || |||||||| Sbjct 5399215 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCAT 5399264 >seq5054 Length=501 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||| ||| |||| |||||| || | |||| ||||| |||||| || ||| Sbjct 437 ATACCTCCTCGAAGACGTAGTACTAAGTGCAGGGTAGATTCTTTCTGAATATTGTAGTCT 378 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || |||||||| || ||||| || || | |||||||||||| || Sbjct 377 GATAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCTGGA 318 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || ||||| ||| ||||| || |||||||| | ||| Sbjct 317 GGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACATTTTCAATTGTATCTGAAGCTTCA 258 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || || || ||||||| ||||| | || |||||||| Sbjct 257 ACCTCAAGGGTGATTGTCTTGCCAGTTAGAGTTTTTACAAAGATCTGCAT 208 >seq8861 Length=554 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || |||| || ||||| | ||||| ||||| || || || || Sbjct 239 ATTCCACCTCTGAGACGTAGCACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 298 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || |||||||| |||| ||| || || || Sbjct 299 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGG 358 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| ||| || || || | ||| Sbjct 359 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCTATGGTGTCAGATGCTTCA 418 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || ||||||||||| || | |||||| | || |||||||| Sbjct 419 ACTTCTAGTGTGATGGTTTTACCGGTAAGTGTTTTCACAAAGATCTGCAT 468 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| || || ||||| | ||||| ||||| || || || || Sbjct 11 ATGCCACCACGCAGTCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCA 70 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | ||||| || |||||||| |||| ||| || || || Sbjct 71 GATAATGTACGACCATCTTCAAGCTGTTTGCCCGCAAAAATCAATCGCTGCTGATCTGGG 130 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || ||| ||||| || || || || | ||| Sbjct 131 GGAATTCCCTCTTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCAGATGCTTCA 190 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || ||||||||||| || | |||||| | || ||||||||| Sbjct 191 ACTTCCAATGTGATGGTTTTACCGGTAAGTGTTTTCACAAAAATCTGCATT 241 >seq483 Length=1310704 Score = 102 bits (112), Expect = 1e-16 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 39417 GAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCT 39476 ||||||||||||||||| ||| |||||| ||||| || || ||| || ||||| Sbjct 166353 GAATACATTTCAGAATGAACATTTTCCATGGCTATCTGGAAGCCATAGAAACATCTTGCC 166294 Query 39477 TC--TGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCAT 39534 || ||| | |||||||| | |||| ||||| || || ||| |||||| |||| Sbjct 166293 TCAGTGACT--TGAACTTCTTGTGAAAATCTCTCAACCAAGTTTTCATTTACAATGCCAT 166236 Query 39535 CAGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAAT 39594 | || || || ||||| || | |||| || || |||||| | ||| |||||||||| Sbjct 166235 CTGAAGCCGCAAAGAAAGCAAGGACATGCTTGATGAAATGTCTCTCACTATCTTTTAAGG 166176 Query 39595 TTTCCCA 39601 ||||||| Sbjct 166175 TTTCCCA 166169 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 39144 AAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTC 39203 |||||| | ||||| || |||| ||||||||| || || | ||| ||||| | || | | Sbjct 173495 AAACCT-CATCCCTGGAAATAAGTTCATTACTGAATGTAAGTCCCGGCATAAGGCCCCGC 173437 Query 39204 TTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCA 39263 ||||| ||||| || || || |||||||| | || || || || || || ||| ||| Sbjct 173436 TTTTTGAGCCAGAAGATGGAAGCAAAACTGCCTGAGAAAAAGATTCCTTCTACAGCTGCA 173377 Query 39264 AATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCAATTTATGGCCCAA 39323 || || | || ||| | ||||| || | | | |||||| | || |||||| Sbjct 173376 AAGGCAACAATCCTTTCACCAAATGTTGCAGTCTTGCTTGCAATCCACTGTAGAGCCCAA 173317 Query 39324 TCTGCttttttttt 39337 |||||||| || || Sbjct 173316 TCTGCTTTCTTCTT 173303 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 38819 CATCACATTGTATTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTC 38878 ||||||| | ||||||||||||| |||||| || || ||||||||||| || ||||| Sbjct 174284 CATCACACCGCATTTTTGGTATTCTCCAACTTTCTTCTCAAAAAAGTTTGTCTTACCTTC 174225 Query 38879 TAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAAT 38925 | ||||||| |||||| || || || || || || || || |||| Sbjct 174224 CAGCGATATTAGATTCATGAAGTCGAAGGGGTTCTTTGTGTTGTAAT 174178 >seq5052 Length=501 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 112892 ATCATCTATATTATCTATATCTTTATCATGTTCTGTATGGAAATATTCGCTATCATGTTT 112951 |||||| | | ||| |||||| | ||||| ||| ||||| |||| | || ||| Sbjct 366 ATCATCAACAGTATTTATATCATAATCATATTCAGTATGATAATAATTAGAATTGGATTT 307 Query 112952 TTTACTATAAATAAATCTTAATTGTGTATTTTTTCTAAAT-GGTGCTAAATCTATATTTT 113010 ||||||||| || |||||||| |||||||||||||||| ||| | ||||||||||| Sbjct 306 TTTACTATATATTAATCTTAACAATGTATTTTTTCTAAATAAGTGAT-CATCTATATTTT 248 Query 113011 TAA 113013 ||| Sbjct 247 TAA 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904644250925400