Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq38757 104 4e-16 seq34987 104 4e-16 seq33086 104 4e-16 seq32901 104 4e-16 seq30508 104 4e-16 seq25306 104 4e-16 seq20596 104 4e-16 seq1613 104 4e-16 seq15588 100 5e-15 seq264 95.1 2e-13 seq483 91.5 2e-12 >seq38757 Length=879 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 86 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 145 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 146 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 205 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 206 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 263 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 264 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 323 Query 1485708 GTAAA 1485712 ||||| Sbjct 324 GTAAA 328 >seq34987 Length=759 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 153 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 212 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 213 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 272 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 273 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 330 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 331 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 390 Query 1485708 GTAAA 1485712 ||||| Sbjct 391 GTAAA 395 >seq33086 Length=730 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 187 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 246 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 247 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 306 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 307 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 364 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 365 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 424 Query 1485708 GTAAA 1485712 ||||| Sbjct 425 GTAAA 429 >seq32901 Length=728 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 232 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 291 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 292 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 351 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 352 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 409 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 410 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 469 Query 1485708 GTAAA 1485712 ||||| Sbjct 470 GTAAA 474 >seq30508 Length=705 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 550 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 491 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 490 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 431 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 430 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 373 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 372 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 313 Query 1485708 GTAAA 1485712 ||||| Sbjct 312 GTAAA 308 >seq25306 Length=667 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 94 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 153 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 154 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 213 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 214 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 271 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 272 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 331 Query 1485708 GTAAA 1485712 ||||| Sbjct 332 GTAAA 336 >seq20596 Length=638 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 138 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 197 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 198 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 257 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 258 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 315 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 316 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 375 Query 1485708 GTAAA 1485712 ||||| Sbjct 376 GTAAA 380 >seq1613 Length=2550 Score = 104 bits (114), Expect = 4e-16 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 2077 TGTATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTA 2018 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||| | ||||| | ||| | | | ||||| |||||||| | | Sbjct 2017 ACAACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAAT 1958 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || || || | |||| || |||| |||||||| || ||||| || Sbjct 1957 GGGCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATT 1900 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||||||||| | ||| | || || || |||||| || |||||||| ||||| || Sbjct 1899 CATGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTT 1840 Query 1485708 GTAAA 1485712 ||||| Sbjct 1839 GTAAA 1835 >seq15588 Length=607 Score = 100 bits (110), Expect = 5e-15 Identities = 169/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || || |||||||| ||||| || || ||| |||||| |||| ||||| || | | Sbjct 1 TATTTCGTGACGGCTTTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTAAC 60 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGTGC 1485589 | || | ||| | ||||| | ||| | | | ||||| |||||||| | || Sbjct 61 AACAATCTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAATGG 120 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| || || || || | |||| || |||| |||||||| || ||||| |||| Sbjct 121 GCG--AGACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATTCA 178 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| | ||| | || || || |||||| || |||||||| ||||| |||| Sbjct 179 TGATCGACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTTGT 238 Query 1485710 AAA 1485712 ||| Sbjct 239 AAA 241 >seq264 Length=8474 Score = 95.1 bits (104), Expect = 2e-13 Identities = 165/237 (70%), Gaps = 5/237 (2%) Strand=Plus/Plus Query 1485478 GTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGG 1485537 |||||||| ||||| || || ||| |||||| |||| ||||| || | | | || Sbjct 1 GTGACGGC-TTGGTTCCTTCACTGACCGCGTGCTTGGCGAGTTCACCCGGTAACAACAAT 59 Query 1485538 CGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGTGCGCGCCA 1485595 | ||| | ||||| | ||| | | | ||||| |||||||| | || ||| | Sbjct 60 CTCACTGAAGTCTGAACCTCCCTCGAGGTTATCGTCGAACGCTTGTTGTAATGGGCG--A 117 Query 1485596 GGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCG 1485655 | || || || | |||| || |||| |||||||| || ||||| |||||||||| Sbjct 118 GACGAGAAGCTTCTGCAGCGATACGTTCGAAGATGTCGTTCACGAACGAATTCATGATCG 177 Query 1485656 ACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 |||| | ||| | || || || |||||| || |||||||| ||||| ||||||| Sbjct 178 ACATGGCTTTACTCGAAATACCGGTGTCGGGATGGACCTGCTTCAGCACTTTGTAAA 234 >seq483 Length=1310704 Score = 91.5 bits (100), Expect = 2e-12 Identities = 123/169 (73%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || || ||||| ||||| ||||| |||||||| ||||||| | |||||||| |||||| Sbjct 173457 AGTCCCGGCATAAGGCCCCGCTTTTTGAGCCAGAAGATGGAAGCAAAACTGCCTGAGAAA 173398 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| || || || || |||||| | || | || || |||| || | ||| ||| Sbjct 173397 AAGATTCCTTCTACAGCTGCAAAGGCAACAATCCTTTCACCAAATGT-TGCAG----TCT 173343 Query 794497 TTGTTG--ATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGG 794543 | ||| ||||||| | ||||| ||||| || ||| | || |||| Sbjct 173342 TGCTTGCAATCCACTGTAGAGCCCAATCTGCTTTCTTCTTTACACAGGG 173294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7911623042455257