Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq762 114 1e-20 seq8861 82.4 6e-11 >seq762 Length=5301712 Score = 114 bits (126), Expect = 1e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 99851 ATGTCCGGCCCCGTGCACCCTAAATACGGCACTAAATCTGCACGTTTAGAAACTTTTGTG 99910 ||| |||||||||||||| | ||| ||| | | || || | | || || | Sbjct 754126 ATGCCCGGCCCCGTGCACGCGCGGTACTCCACCGAGGCCGCGCGGCTCGCCACCTTCAAG 754185 Query 99911 GATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTAC 99970 || |||||| || || |||||||| ||| || |||| || ||||| || | || Sbjct 754186 GACTGGCCGAGATGTATGCGCCAAAAACCCGAGGAACTGGCAGAGGCCGGATTCTTCTAT 754245 Query 99971 ACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAA 100030 || ||| ||||||||||| ||||| || |||||||||| || || ||||| |||||| Sbjct 754246 ACAGGCCAAGGTGACAAAACGAAATGCTTCTATTGCGACGGAGGGCTAAAAGATTGGGAA 754305 Query 100031 AGCACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGC 100088 ||| |||| |||||| | | ||||| | ||||| || |||||| | ||||||| Sbjct 754306 AGCGATGACGTTCCGTGGGAACAGCACGCCAGATGGTTCGACCGCTGCGCGTACGTGC 754363 >seq8861 Length=554 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| |||||||| |||||| | || || || ||||| || ||||| ||| | Sbjct 241 AATGCAGATTTTTGTGAAAACACTTACCGGTAAAACCATCACATTGGAAGTTGAAGCATC 182 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | | | | |||||| || ||| |||||||| || | ||| ||||| Sbjct 181 TGACACCATCGAAAATGTGAAAGCCAAGATTCAGGACAAAGAGGGAATTCCCCCAGATCA 122 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 || | | |||| |||||||||||| | |||||| || | | ||| | | ||| Sbjct 121 GCAGCGATTGATTTTTGCGGGCAAACAGCTTGAAGATGGTCGTACATTATCTG--ACTAC 64 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 ||||| || ||||||||||| || ||||| || ||||| Sbjct 63 AACATCCAGAAAGAATCTACTCTGCATTTGGTTTTGAG 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402116483873504