Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq21284 1122 0.0 >seq21284 Length=642 Score = 1122 bits (1244), Expect = 0.0 Identities = 634/642 (99%), Gaps = 0/642 (0%) Strand=Plus/Minus Query 27340 TGCAGTTCCCGTTGATAGGAGTCATAGGCCATGAAGGATTCAGGCCTTTCAGGTACTTCT 27399 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 642 TGCAGTTCCCGTTGATAGGAGTCATAGCCCATGAAGGATTCAGGCCTTTCAGGTACTTCT 583 Query 27400 GACCGCCATCTATAACCAGTTTCTTGAATGTTGCTTCGTTCGCGTCAGTCAGTTTGGCTA 27459 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 582 GACCGCCATCTATGACCAGTTTCTTGACTGTTGCTTCGTTCGCGTCAGTCAGTTTGGCTA 523 Query 27460 CAACAAGGCTTCCATTCACTGGCTCGCGTCCAGTATCTACTAACACCATATGACCTTCAG 27519 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 522 CAACAAGGCTTCCATTCACTGGCTCGCGTCCAGTATCTACTGACACCATATGACCTTCAG 463 Query 27520 GGATGCTTTGACCTACAGGTGAGGTCATGGAATCACCTTCAACCCTCAGCCAGAATCCAT 27579 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 462 GGATGCTTTGACCTACAGGTGAGGTCATGGAATCACCTTCAACCTTCAGCCAGAATCCAT 403 Query 27580 CGCCTAATAAGTTAACGTCACTGTCATACCATTCATCAATGTCCTTGATATCGTAGGGTT 27639 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 402 TGCCTAATAAGTTAACGTCACTGTCATACCATTCATCAATGTCCTTGATATCGTAGGGTT 343 Query 27640 CACAAGCTTCACACCACGAACCAGCTCTAACCATGCTAATCAATGGATATTTCCCTTTGG 27699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 342 CACAAGCTTCACACCACGAACCAGCTCTAACCATGCTAATCAATGGATATTTCCCTTTGG 283 Query 27700 GCTCAACGTGCCCAACAAATCTAACATTCGAATCAGAGGTGCCATTGAGCAGCCAGTCAA 27759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282 GCTCAACGTGCCCAACAAATCTAACATTCGAATCAGAGGTGCCATTGAGCAGCCAGTCAA 223 Query 27760 CACTTACGCCAAGAGCTGACGCAAGTTCTGGTAAAAAGCGTGGTCGCTTAGTTTTACCGT 27819 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 CACTTACGCCAAGAGCTGACGCAAGTTCTGGTAAAAAGCGTGGTCGCTTAGTTTTACCGT 163 Query 27820 TTTCGAGCTGCTCTATAGACTGCTGGGTAGTCCCCACCTTTTGAGCAAGTTCAGCCTGGT 27879 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 TTTCGAGCTGCTCTATAGACTGCTGGGTAGTCCCCACCTTTTGAGCAAGTTCAGCCTGGT 103 Query 27880 TAAGTCCAAGCTGAATTCTTTTGCTTTTTACCCTGGAAGAAATACTCATAAGCCACCTCT 27939 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102 TAAGTCCAAGCTGAATTCTTTTGCTTTTTACCCTGGAAGAAATACTCATAAGCCACCTCT 43 Query 27940 GTTATTTACCTCCAATCTTCACAAGAAAAACTGTATTTGACA 27981 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct 42 GTTATTTACCCCCAATCTTCACAAGAGAAACTGTATTTGACA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123788876705824