Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq483 113 4e-20 >seq483 Length=1310704 Score = 113 bits (124), Expect = 4e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 43856 GCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA 43915 || || ||||| || || || || || |||||||| |||||| | ||| | ||| Sbjct 166217 GCTTTCTTTGCGGCTTCAGATGGCATTGTAAATGAAAACTTGGTTGAGAGATTTTCACAA 166276 Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 ||||||||| | | || ||| ||||||| ||||| || || || ||||| |||||| || Sbjct 166277 GAAGTTCAAGTCACTGAGGCAAGATGTTTCTATGGCTTCCAGATAGCCATGGAAAATGTT 166336 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 ||||| |||||||| || || |||||||| ||||||| |||| Sbjct 166337 CATTCTGAAATGTATTCCCTGCTTATAGATACCTACATCAGAGAT 166381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397245465445315