Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq483 93.3 5e-14 >seq483 Length=1310704 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/193 (73%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 59924 TAAACAA-AAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGA--GCATCATTTGCAC 59979 |||| || |||||||| ||||| | |||||||| | | || ||| |||||| Sbjct 173301 TAAAGAAGAAAGCAGATTGGGCTCTACAGTGGATTGCAAGCAAGACTGCAACATTTGGTG 173360 Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTG-TGCT 60038 || | | | || |||||| || ||||||||||| ||||| ||| ||| || | | Sbjct 173361 AAAGGATTGTTGCCTTTGCAGCTGTAGAAGGAATCTTTTTCTCAGGC-AGTTTTGCTTCC 173419 Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || ||||||||||||||||| ||||| |||||||| || | ||| || || || ||| Sbjct 173420 ATCTTCTGGCTCAAAAAGCGGGGCCTTATGCCGGGACTTACATTCAGTAATGAACTTATT 173479 Query 60099 TCCCGGGACGAGG 60111 ||| |||| |||| Sbjct 173480 TCCAGGGATGAGG 173492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548226793332720