Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq483 113 4e-20 >seq483 Length=1310704 Score = 113 bits (124), Expect = 4e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 || || || ||||| || ||| ||||||||||||||| | |||||| || || ||||| Sbjct 166374 ATGTAGGTATCTATAAGCAGGGAATACATTTCAGAATGAACATTTTCCATGGCTATCTGG 166315 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937 || || || || ||||| || || || ||||||||||| | ||||||| || || ||| Sbjct 166314 AAGCCATAGAAACATCTTGCCTCAGTGACTTGAACTTCTTGTGAAAATCTCTCAACCAAG 166255 Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984 ||||| ||||| || || || || ||||| || || | ||||| Sbjct 166254 TTTTCATTTACAATGCCATCTGAAGCCGCAAAGAAAGCAAGGACATG 166208 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 4363 TTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGT 4422 ||||| | ||||| |||| || || ||||| ||||| ||||| ||| |||||||||| Sbjct 173988 TTAGATCAACAAGTAATCTATCTGCAACAAACTCTATGTACTGAGACATTAGTTCGCAGT 173929 Query 4423 TAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGG 4482 | || || | | ||| ||||| ||||| | ||| | |||||||||||| || ||| | Sbjct 173928 TCATACCGAGCAGTCTTACAGGGAGCGCATCTGTGAGAAACTCTTGTTCAATGACTACTG 173869 Query 4483 CTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACA 4542 | ||| | || |||| | || |||| ||| || | ||||||| | |||| Sbjct 173868 CATCTTTTATAATATGCAGGACACATTCCTTAGTTGGCTTTTGAACTAAGTGTTGGAACA 173809 Query 4543 ATAAACACGCAAAATCACAATGCAAACC 4570 | ||| |||||||| ||||| ||| Sbjct 173808 TCAGACAAGCAAAATCTGTATGCAGACC 173781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426823389558179