Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq466 654 0.0 seq483 105 1e-17 >seq466 Length=1632705 Score = 654 bits (724), Expect = 0.0 Identities = 1255/1826 (69%), Gaps = 42/1826 (2%) Strand=Plus/Plus Query 75332 ATTTCAGAATTACATACTACTGACTTTA-TTTTA---TTC---TTATCCAACGTGAACTG 75384 |||||||| |||| || || | | |||| ||||| || ||||||| || || || Sbjct 916785 ATTTCAGATTTAC-TATTATTCATTTTAGTTTTAACTTTGGATTTATCCACAGTAAATTG 916843 Query 75385 AATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACT 75444 |||| | || ||| |||||||| || | ||| ||||| || ||||||| ||||| | Sbjct 916844 TATGGCATTGGCTGCCGGTTTTGTTCGCAAATAATACATCCCTGTTTTTAAACCCATTTT 916903 Query 75445 CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATT 75504 |||| |||||||| || |||| ||| || |||| || || | || ||||| Sbjct 916904 CCATGAATAGAAATGAATAGAAGTTAATTTTCCGTAGTTCGGTTCAGCAACGTGTATATT 916963 Query 75505 CATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTT 75564 | || ||||||||||| || |||||||| | |||||| ||||||| ||| || | || Sbjct 916964 AAAAGATTGACTTTGATCAATAAAAGCTCCACGATCAGCAGCCATTTGTAT--TGTTGTT 917021 Query 75565 TTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG-- 75620 |||| | ||||||||||| || || | | | | || || || | | || Sbjct 917022 TTGACTGAAATTTCCCAAACTGTCTTATATAAGTCCCTTATTTCTGTAGGTATACTTTCG 917081 Query 75621 -TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAAT 75679 ||||||| || ||||| || |||||| ||| || || || |||| ||| || Sbjct 917082 ATATTTTGTATAGATCCATTATTGTGTATAATGAGATTTTTCATTTCCTCATCCCATAAA 917141 Query 75680 TTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAAT 75739 | | || || ||| | | ||| | |||| |||| |||| ||||||||||||||| || Sbjct 917142 TCTGCTTCTGTCAAATCACGAAGTAAATGATGATTTACAACTTGAAATTCTCCAGATAAA 917201 Query 75740 AC---TCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAA 75796 || |||| || ||||||||| || | || || | ||||||||| ||||| ||| Sbjct 917202 ACACGTCTTTGA---TAAATATTAGAAGTGAAGGGCTCAAAAGATTCATTATTTCCTAAA 917258 Query 75797 ATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGT 75856 || ||||| ||||| ||||| ||||| || || ||||| | | ||| | |||||||| Sbjct 917259 ATCTGAGCTGTTGAGGCAGTGGGCATTGGGGCTACCAAAAGAGAATTACGAAGACCATGC 917318 Query 75857 GTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAG 75916 | || || ||||||| | |||| ||||| | ||||| ||| || ||| Sbjct 917319 TTGGCAATGTTTTCTTTTAAAGCAGTCCAGTCCCATAAATCTGTTGGATTTTTATTCCAC 917378 Query 75917 AGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCG 75976 | ||||| |||| || || || ||| |||| | |||||||| || || Sbjct 917379 ATTTCGTACTGTAATATGCCTCGACTTGCAGGGCATCCTTCGTATGTTTCATACACTCCA 917438 Query 75977 TCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATC 76036 | |||||| |||||||| ||||| ||||||| || || || ||||| ||||| || || Sbjct 917439 TACTTTTCTGCTAGTTCACAACTTGCCTCTAGTGCTCCATAGTAAATAGTTTCAAATATT 917498 Query 76037 TTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCA 76096 | | ||| | | ||||| |||| || |||| || | | | |||||| ||| Sbjct 917499 TGTTGATTTAATTTAATAGCTTCTGGACTTTCGTAAGGTAAACGCATTAAAATAAAAGCA 917558 Query 76097 TCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCT 76156 || || || || ||||| || || ||||||||||||||||| ||| || ||| ||| Sbjct 917559 TCAGCAAGACCTTGAACACCTATTCCAATAGGTCTATGTCTAAGATTAGATTTTTTTGCT 917618 Query 76157 TCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGA-TTTCTGACAACTA-CTT 76214 || |||| |||||||||||| | ||| || |||||||| | | |||||| | || || Sbjct 917619 TCCGGAACAGGGTAATAATTTACATCAATGATTTTATTCAAATTTTCTGTTA--TAGTTT 917676 Query 76215 TAACCACGTCCTTTAGTTTGAGAAAATCAAAT-TTTCCATCT-ATC-ACAAACATATTAA 76271 || || || |||| ||| ||| | | || ||| | | ||| ||||||||||| | Sbjct 917677 TAGTAACTTCTTTTAATTTCTTAAAGTTATATGTTTTGTTATCATCAACAAACATATTTA 917736 Query 76272 GAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCT 76331 | |||||||| |||| || || || || || |||| | || | ||||| | ||| | Sbjct 917737 GCGCTATAGAGGCTAAGTTGCATACTGCCACTTCATCATCAGATGTATATTCAACTATTT 917796 Query 76332 CCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTAC 76391 | ||||| || |||||||| || || || || | ||||| || || || ||| | |||| Sbjct 917797 CAGTGCACAGGTTACTACATTTTATGGTACCTAAATTTTTCTGATTACTTTTTCTATTAC 917856 Query 76392 ATGAGTCCTTATAAAGAACA--AACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGA 76449 |||| || | |||| |||| | ||||| ||||| || | || | ||| || || | Sbjct 917857 ATGAATC--TTTAAATAACATGTATGGAGTACCAGTCTCTACTTGAGCTTCTATTATTGC 917914 Query 76450 TTTCCAGACGACTCTAGCTTTTATTATAGATTT--GTATCGCTTCTCTCTTTCATATTGT 76507 |||||| | ||| || ||| | | ||| ||| || ||| |||||||| | Sbjct 917915 TTTCCAAAGAACTTGTGCCCTTA--CTTGTTTTACAAATCTATTTTCTTTTTCATATGTT 917972 Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567 |||||| ||||||||| | ||||||| ||| | || || || || |||| ||| Sbjct 917973 TCATATAAGGATTCAAATTCTTTTCCCCAACAGTCAGCTAACCCTGGGCAATCATGAGGA 918032 Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627 ||||| | | ||| | ||||| | | ||| | |||||| || |||||||||||||| Sbjct 918033 CACATAAGGGTCCATACGCCATCATTTTCAACTCTTTTCATGAAAAGATCAGGTATCCAC 918092 Query 76628 AGAGCAATAAATAGATCTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAAGATC 76686 | ||| ||| || || | || | ||| |||||| ||||| || || || || | ||| Sbjct 918093 AATGCATAAAAAAGTTCCCTGGCACGTAC-TTCTTCTTTTCCAGTGTTTTTCTTTAAATC 918151 Query 76687 TAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCG 76746 || ||| || | ||||| | |||||| ||||| | ||| | || | | | || || || Sbjct 918152 TAAGAATTCAAATATATCGGCATGCCACGGTTCCAAATAGACTGCAAAAGCTCCAGGGCG 918211 Query 76747 TTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAAT 76806 ||||||||||| ||||| | |||||| || || ||||| ||||||| |||||||| | Sbjct 918212 CTTATTACCTCCTTGATCAACATATCTAGCTGTATTATTGTAAACTCGTAACATTGGTAC 918271 Query 76807 AATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTA 76864 || || || ||| |||||||||||| | |||||| | || || | || | | Sbjct 918272 AAGACCATTTGATACACCATTTGTTCCTGCTATATAAGTACCTTTAGCCCTTATACAGTG 918331 Query 76865 CTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTG 76924 || || | || ||||| ||||| |||||| || | |||||| | || || || Sbjct 918332 GACATGGACA--CCAATTCCACCTGCAGATTTAGATATCAAAGCACACTGCTTTAAGGTA 918389 Query 76925 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 76984 || || || || || || || ||||| |||| | |||||||| || | ||| Sbjct 918390 TCGTAAATTCCTTCAATGCTGTCATCTTTCATTGCCACTAGAAAACATGATGATAGTTGG 918449 Query 76985 TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAA 77044 | | |||| | || || || || || ||||||||||| |||| |||||| Sbjct 918450 GGGCGTGGAGTTGCAGCTGAGAATAAGGTTGGGCTGGCATGAGTGAAATATTTCTCAGAA 918509 Query 77045 AGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACA 77104 |||| |||||||| | || |||| || ||||| ||||||||| | | || Sbjct 918510 AGTAAGTTGTATGTATTTATGGCTGCATCAATATCTTCACCATGAATTCCAATTGACACT 918569 Query 77105 CGCATCAACATATGCTGAGGTCGTTC 77130 ||||||| |||||| ||||||||||| Sbjct 918570 CGCATCAGCATATGTTGAGGTCGTTC 918595 >seq483 Length=1310704 Score = 105 bits (116), Expect = 1e-17 Identities = 159/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||| || ||| | ||| ||| ||||| || || ||||| || || ||||||||| Sbjct 173490 TCATCCCTGGAAATAAGTTCATTACTGAATGTAAGTCCCGGCATAAGGCCCCGCTTTTTG 173431 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| || || | || ||| || || || || || ||||||||||| || || || Sbjct 173430 AGCCAGAAGATGGAAGCAAAACTGCCTGAGAAAAAGATTCCTTCTACAGCTGCAAAGGCA 173371 Query 46774 ACAAGTCTCTCTCCGTAACTGGCA-TCAT--TATGAATCCACCTTTGAGCCCAATCAGCC 46830 |||| || || || | | ||| || | | ||||||| | |||||||||| || Sbjct 173370 ACAATCCTTTCACCAAATGTTGCAGTCTTGCTTGCAATCCACTGTAGAGCCCAATCTGCT 173311 Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 || ||||||||||| || | || || | |||||||| ||||| Sbjct 173310 TTCTTCTTTACACAGGGAAGAGTCTCAACCGCATTAAACAGAAA 173267 Score = 100 bits (110), Expect = 4e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959 || |||||||| | || ||||||||| ||||||| ||||| || || ||||| || Sbjct 166371 TAGGTATCTATAAGCAGGGAATACATTTCAGAATGAACATTTTCCATGGCTATCTGGAAG 166312 Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTC 47019 || || ||||||||||| ||||| | || || ||| |||||| ||| ||| || Sbjct 166311 CCATAGAAACATCTTGCCTCAGTGACTTGAACTTCTTGTGAAAATCTCTCAACCAAGTTT 166252 Query 47020 TCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTT 47079 ||||| || || ||||| ||| ||||| || || | ||||| || || |||| | | Sbjct 166251 TCATTTACAATGCCATCTGAAGCCGCAAAGAAAGCAAGGACATGCTTGATGAAATGTCTC 166192 Query 47080 TCA 47082 ||| Sbjct 166191 TCA 166189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712547071652160