Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq409 93.3 4e-14 >seq409 Length=488447 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 ||||| || || ||||| ||| || ||||||||||| || || | |||||| || Sbjct 75206 AAAGTCAAGCCAGGCATGAGTCCACGCTTCTTTAACCAAAAGATAGAAGCAAAACTGCCT 75265 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372 || || || |||||||| |||| |||||| || || | ||||| | |||| ||| | Sbjct 75266 GAGAAAAAAATACCCTCTACAGCTGCAAATGCTATAATACGTTCTCCAAACGTGGCAGTT 75325 Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432 || | |||||||| || |||| || || || | ||| | |||| || |||||| Sbjct 75326 TTGCTTGCAATCCATTGTAGTGCCCAGTCCGCCTTCTTTTTAACACAAGGCAAAGTTTCT 75385 Query 16433 ATGGCCTTAAACAA 16446 || || ||||| || Sbjct 75386 ATAGCATTAAATAA 75399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511156397827880