Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 284 1e-71
seq3626 109 5e-19
seq4182 102 7e-17
>seq4146
Length=100757
Score = 284 bits (314), Expect = 1e-71
Identities = 365/501 (73%), Gaps = 2/501 (0%)
Strand=Plus/Plus
Query 105997 gggTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056
|| ||||| ||||| || || || ||||||||||| ||||| ||||| || |||||||||
Sbjct 16135 GGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTC 16194
Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGTTTCTTTTTTCAACATCGTGC 106116
|| ||| || || || || || || | |||||| | ||||||| | ||| |
Sbjct 16195 CAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTTACCTTATCATCA 16254
Query 106117 ATAAAATAAAATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAAATGG 106176
| ||| || ||||| |||| || ||||||||||| ||||| ||||||| || ||||
Sbjct 16255 AAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATCA 16314
Query 106177 GGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCGTTCCAA 106236
|| | ||| ||| | ||||| |||||||| |||||||| || || ||||||||
Sbjct 16315 GGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCAG 16374
Query 106237 GCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCAACTTTG 106296
| ||||| ||| || || |||||||||| || ||||| || || || || | |||||||
Sbjct 16375 GAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTTG 16434
Query 106297 AAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATCGTTTTG 106356
|| || || || || |||| ||||||||||||| || || ||||| || |||
Sbjct 16435 AAGTCCTCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTCTTTT 16494
Query 106357 AGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAAG-TGTGA 106415
| |||||| ||||| || ||||| |||||||| || || || || || ||| ||||
Sbjct 16495 AAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTA-AAGAAGATGTGT 16553
Query 106416 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCACTCAAC 106475
| |||||| | ||| || || ||||| || || || | ||| ||||||||||| ||
Sbjct 16554 AAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCAC 16613
Query 106476 AAAGTACGCAGCGACAATTTT 106496
||| || || |||| | |||
Sbjct 16614 AAAATAAGCTCCGACGACTTT 16634
>seq3626
Length=201135
Score = 109 bits (120), Expect = 5e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
||||||||| |||||| | || ||| | || || |||||||| ||| || || ||
Sbjct 59061 AAAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCC 59120
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| || || | | || | || |||||| || ||||||||| | || ||
Sbjct 59121 ATCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGA 59180
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGAT 29135
||| || |||||||||| || || ||||| || |||||| | | ||| | | |||
Sbjct 59181 TCAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCT--CTGAT 59238
Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| ||||| ||||||||||| |||||| |||| ||||| |||||||| ||
Sbjct 59239 TACAACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGG 59291
>seq4182
Length=188933
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
|| |||||| |||||| | ||||| | ||||| |||||||| ||| ||| ||| |
Sbjct 74502 AACAATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGC 74443
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| || || | | || | || |||||| |||||||||||| | || ||
Sbjct 74442 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGA 74383
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137
||| ||| | | |||||||| || ||||| ||||||||| | || | |||| ||
Sbjct 74382 TCAGCAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTA 74323
Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||||||||||||| ||||| | || | ||||| | ||| |||||||
Sbjct 74322 CAATATTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGG 74272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428125312096145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |