Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4146 170 2e-37 seq3626 127 2e-24 SEQ23448 111 1e-19 >seq4146 Length=100757 Score = 170 bits (188), Expect = 2e-37 Identities = 335/490 (68%), Gaps = 4/490 (1%) Strand=Plus/Plus Query 102548 GGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAACTTC 102607 || || || || || || || || ||||||||||| ||||| || || ||||| || ||| Sbjct 16135 GGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTC 16194 Query 102608 CACACCTGCAAAAACTCTTTAACGGATTCGACAAACACGCGCCGCTTGT-CCGCGTCGTG 102666 || || | || ||||| || ||| | ||||| ||| | || | || || | Sbjct 16195 CAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAA-ACGATCTCTTTTTACCTTATCATC 16253 Query 102667 CATGAAATAGAACGGGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTCAAATG 102726 | || ||||| || || | ||| |||||||| || || || || || | ||||||| Sbjct 16254 AAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATC 16313 Query 102727 CGGGTTTGCCAGCTTGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 102786 || | || | || | ||||| || ||||||||||||||||| || |||||||| Sbjct 16314 AGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCA 16373 Query 102787 TGCGGATACGCCCTTTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGATAGCGACCTT 102846 | ||| | ||||| || || ||||||| || ||||| ||||| ||||||| || || Sbjct 16374 GGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTT 16433 Query 102847 AAAGTCTGCGCGGCCTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCC-GGGAATGGTCT 102905 ||||| | || || |||| || | |||| |||| ||||| || || | | | Sbjct 16434 GAAGTCCTCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTCTTT 16493 Query 102906 TGAGCGCGTCGTTTAGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAGCAGATGGG 102965 | | | |||||| | ||||| ||||| || || ||||| || ||||| || ||||| | Sbjct 16494 TAAAC-TGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGATGTG 16552 Query 102966 ACAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGCCGCGGCCGTACACGCCCCACTCTA 103025 || || || | || || || || || || || | ||| || |||||||| | Sbjct 16553 TAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCA 16612 Query 103026 CGAAATACGC 103035 | ||||| || Sbjct 16613 CAAAATAAGC 16622 >seq3626 Length=201135 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | ||| || | || | ||||||||| ||||||||||| ||||| | Sbjct 59519 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAA 59460 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| ||||||||||| || ||| |||| || | ||||||||| || Sbjct 59459 AGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGG 59400 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| ||| || || || | ||| |||||| ||||| | Sbjct 59399 ATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACT 59340 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | |||||| ||||| || || | ||||| ||||| ||||||||| Sbjct 59339 TCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCATT 59292 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 || || ||||| || | | |||| ||||||||||| |||||||||||||||||||| Sbjct 60206 TTGCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCA 60147 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | |||||| | | || ||||| || || || ||| | ||||||| ||| ||||| Sbjct 60146 GAAAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGA 60087 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||||||||| ||| || ||| || | | | || || || || Sbjct 60086 GGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 60027 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||||||||||| || || | || |||||||| || ||||| Sbjct 60026 ACTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | ||| || | || | ||||||||| ||||||||||| ||||| | | Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || ||||| ||||| || ||| | || |||| ||| ||||| || Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||| || ||| || | | | || || || || | Sbjct 59855 ATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59796 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| ||||| || || | || |||||||| || ||||| Sbjct 59795 TCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | || || | || | ||||||||| ||||||||||| ||||| | | Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || |||| ||||| || ||| | || |||| ||| ||||| || Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||| || ||| || | | | || || || || | Sbjct 59627 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59568 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| || || | || || ||||| || ||||| Sbjct 59567 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521 >SEQ23448 Length=38375 Score = 111 bits (122), Expect = 1e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788 || |||||||| ||||||||| ||| | ||||||| | | ||||||| || |||||| Sbjct 9690 GGTGGCGTGGGACTGAACCTGTGCGGGGCCAACCACCTGCTGGTGCTGGACCCCCACTGG 9749 Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAG 38839 |||||||| | |||| ||||||||| ||||||||| ||||| |||||||| Sbjct 9750 AACCCGCAGCTCGAGCAGCAGGCGCAGGACCGCATCTACCGCGTGGGCCAG 9800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422051501124044