Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 170 2e-37
seq3626 127 2e-24
SEQ23448 111 1e-19
>seq4146
Length=100757
Score = 170 bits (188), Expect = 2e-37
Identities = 335/490 (68%), Gaps = 4/490 (1%)
Strand=Plus/Plus
Query 102548 GGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAACTTC 102607
|| || || || || || || || ||||||||||| ||||| || || ||||| || |||
Sbjct 16135 GGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTC 16194
Query 102608 CACACCTGCAAAAACTCTTTAACGGATTCGACAAACACGCGCCGCTTGT-CCGCGTCGTG 102666
|| || | || ||||| || ||| | ||||| ||| | || | || || |
Sbjct 16195 CAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAA-ACGATCTCTTTTTACCTTATCATC 16253
Query 102667 CATGAAATAGAACGGGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTCAAATG 102726
| || ||||| || || | ||| |||||||| || || || || || | |||||||
Sbjct 16254 AAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATC 16313
Query 102727 CGGGTTTGCCAGCTTGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 102786
|| | || | || | ||||| || ||||||||||||||||| || ||||||||
Sbjct 16314 AGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCA 16373
Query 102787 TGCGGATACGCCCTTTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGATAGCGACCTT 102846
| ||| | ||||| || || ||||||| || ||||| ||||| ||||||| || ||
Sbjct 16374 GGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTT 16433
Query 102847 AAAGTCTGCGCGGCCTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCC-GGGAATGGTCT 102905
||||| | || || |||| || | |||| |||| ||||| || || | | |
Sbjct 16434 GAAGTCCTCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTCTTT 16493
Query 102906 TGAGCGCGTCGTTTAGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAGCAGATGGG 102965
| | | |||||| | ||||| ||||| || || ||||| || ||||| || ||||| |
Sbjct 16494 TAAAC-TGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGATGTG 16552
Query 102966 ACAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGCCGCGGCCGTACACGCCCCACTCTA 103025
|| || || | || || || || || || || | ||| || |||||||| |
Sbjct 16553 TAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCA 16612
Query 103026 CGAAATACGC 103035
| ||||| ||
Sbjct 16613 CAAAATAAGC 16622
>seq3626
Length=201135
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | ||| || | || | ||||||||| ||||||||||| ||||| |
Sbjct 59519 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAA 59460
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | |||| ||||||||||| || ||| |||| || | ||||||||| ||
Sbjct 59459 AGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGG 59400
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| ||| || || || | ||| |||||| ||||| |
Sbjct 59399 ATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACT 59340
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | |||||| ||||| || || | ||||| ||||| |||||||||
Sbjct 59339 TCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCATT 59292
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| || ||||| || | | |||| ||||||||||| ||||||||||||||||||||
Sbjct 60206 TTGCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCA 60147
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
| |||||| | | || ||||| || || || ||| | ||||||| ||| |||||
Sbjct 60146 GAAAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGA 60087
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | |||||||||||| ||| || ||| || | | | || || || ||
Sbjct 60086 GGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 60027
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||| | ||||||||||| || || | || |||||||| || |||||
Sbjct 60026 ACTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | ||| || | || | ||||||||| ||||||||||| ||||| | |
Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | | || ||||| ||||| || ||| | || |||| ||| ||||| ||
Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||| || ||| || | | | || || || || |
Sbjct 59855 ATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59796
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||| ||||| || || | || |||||||| || |||||
Sbjct 59795 TCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | || || | || | ||||||||| ||||||||||| ||||| | |
Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | | || |||| ||||| || ||| | || |||| ||| ||||| ||
Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||| || ||| || | | | || || || || |
Sbjct 59627 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59568
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||||||||| || || | || || ||||| || |||||
Sbjct 59567 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
>SEQ23448
Length=38375
Score = 111 bits (122), Expect = 1e-19
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788
|| |||||||| ||||||||| ||| | ||||||| | | ||||||| || ||||||
Sbjct 9690 GGTGGCGTGGGACTGAACCTGTGCGGGGCCAACCACCTGCTGGTGCTGGACCCCCACTGG 9749
Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAG 38839
|||||||| | |||| ||||||||| ||||||||| ||||| ||||||||
Sbjct 9750 AACCCGCAGCTCGAGCAGCAGGCGCAGGACCGCATCTACCGCGTGGGCCAG 9800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422051501124044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |