Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 279 4e-70
seq3626 109 5e-19
seq4182 93.3 3e-14
>seq4146
Length=100757
Score = 279 bits (308), Expect = 4e-70
Identities = 364/501 (73%), Gaps = 2/501 (0%)
Strand=Plus/Plus
Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823
|| ||||| ||||| || || || || |||||||| | ||| |||||||| || ||||||
Sbjct 16135 GGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTC 16194
Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGTTTCTTTTTTCAACGTCGTGC 97883
|| ||| | || || || || || | |||||| | ||||||| | || |
Sbjct 16195 CAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTTACCTTATCATCA 16254
Query 97884 ATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATGT 97943
| || ||||| || || | ||| ||||||||||| ||||| ||||||| || | ||
Sbjct 16255 AAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATCA 16314
Query 97944 GGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCAA 98003
|| | ||| |||| | ||||| ||||||||| ||||||||||| |||||||||||
Sbjct 16315 GGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCAG 16374
Query 98004 GCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTTG 98063
| ||||| ||||| || |||||||||| || ||||| || || ||||| | |||||||
Sbjct 16375 GAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTTG 16434
Query 98064 AAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTTG 98123
|| || || || || ||||| |||| ||||| ||||| |||||||| ||| |||
Sbjct 16435 AAGTCCTCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTCTTTT 16494
Query 98124 AGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAG-TGCGA 98182
| |||||| ||||| || || || |||||||| || || ||||| || ||| || |
Sbjct 16495 AAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTA-AAGAAGATGTGT 16553
Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242
| |||||| | ||| || || ||||| || || | | ||| ||||||||||| ||
Sbjct 16554 AAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCAC 16613
Query 98243 AAAGTACGCAGCGACAATTTT 98263
||| || || |||| | |||
Sbjct 16614 AAAATAAGCTCCGACGACTTT 16634
>seq3626
Length=201135
Score = 109 bits (120), Expect = 5e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090
||||||||| |||||| | || ||| | || || |||||||| ||| || || ||
Sbjct 59061 AAAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCC 59120
Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150
| || || | | || | || |||||| || ||||||||| | || ||
Sbjct 59121 ATCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGA 59180
Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CCAAAACTATGGCCGAT 25208
||| || |||||||||| || || ||||| | |||||| | | ||| | | |||
Sbjct 59181 TCAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCT--CTGAT 59238
Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| ||||||||||||||||| |||||| |||| ||||| |||||||| ||
Sbjct 59239 TACAACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGG 59291
>seq4182
Length=188933
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090
|| |||||| |||||| | ||||| | ||||| |||||||| ||| ||| ||| |
Sbjct 74502 AACAATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGC 74443
Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150
| || || | | || | || |||||| |||||||||||| | || ||
Sbjct 74442 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGA 74383
Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210
||| ||| | | |||||||| || ||||| |||||||| | || | |||| ||
Sbjct 74382 TCAGCAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTA 74323
Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||||||| ||||| ||||| | || | ||||| | ||| |||||||
Sbjct 74322 CAATATTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGG 74272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410594739195626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |