Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq688 172 4e-38
seq4146 136 3e-27
seq3626 100 2e-16
seq2492 95.1 1e-14
>seq688
Length=109112
Score = 172 bits (190), Expect = 4e-38
Identities = 400/603 (66%), Gaps = 34/603 (6%)
Strand=Plus/Minus
Query 12871 CTGACTTGCGATTGGAAGAAGTGCGTTTGAACACCTTTGAGAAGTGGCCTGTGTCGTTTT 12930
||||| |||| ||||||| ||| | || || || || ||||||||||| || |||
Sbjct 9960 CTGACATGCGCCGTGAAGAAGAGCGACTCAAAACTTTCGATAAGTGGCCTGTTTCATTTA 9901
Query 12931 TGTCGCCGGAAACCATGGCTAAAAATGGGTTTTACTACTTGGGTAGGAGCGACGAGGTGC 12990
| | || ||| | | |||||||| || || ||||| | || || |||| || ||||
Sbjct 9900 TCACTCCTGAACGCTTAGCTAAAAACGGATTCTACTATCTAGGCCGGGGCGATGAAGTGC 9841
Query 12991 GTTGTGCGTTTTGTAAAGTGGAGATAATGCGTTGGAAGGAGGGCGAAGATCCCGCTGCCG 13050
| ||||| || || ||||| || || ||| | ||| ||| || || ||||| |||| |
Sbjct 9840 GCTGTGCTTTCTGCAAAGTCGAAATCATGAGATGGGTGGAAGGGGACGATCCTGCTGTAG 9781
Query 13051 ACCATAAGAAGTGGGCTCCCCAATGTCCGTTTGTGAAGGGTATCGACGTG------TGCG 13104
| ||| | | |||||| ||||||||||| || | | | ||| | || |||
Sbjct 9780 ATCATCAAAGGTGGGCACCCCAATGTCCATTCCTAA--GACATCAAGCTGGCAATGTGCC 9723
Query 13105 GTTCGATTGT--TACAACCAAT----------AATATCCAA-AATA----CTACAACCCA 13147
| | |||| |||| | | ||| | || || | | ||||| ||
Sbjct 9722 GATGGATTCGCCTACATCTGACGGCCGTGACGAATGTGGAACAAGAGCGCCGACAACTCA 9663
Query 13148 CGACACTATTATCGGT---------CCCGCTCACCCCAAATACGCCCATGAAGCTGCTCG 13198
| | |||| | |||||||||||| ||| || |||||||| ||
Sbjct 9662 AGCTGCGCCTATCCATATTCCACGACCCGCTCACCCCCGATATGCATCCGAAGCTGCCCG 9603
Query 13199 AGTCAAGAGTTTTCACAACTGGCCCCGTTGTATGAAGCAGAGACCCGAGCAGATGGCGGA 13258
|| | ||| | | ||||| || ||||| || | || ||| || | || ||
Sbjct 9602 TCTCCGTACATTTGTCGATTGGCCTCGCAGTATGCGACAAAAGCCTGAGGAGCTAGCCGA 9543
Query 13259 TGCCGGTTTCTTCTACACTGGCTACGGTGACAATACAAAGTGCTTCTATTGTGACGGCGG 13318
|| ||||||||||||||||| | || ||||| || || ||||| | |||||||| ||
Sbjct 9542 AGCTGGTTTCTTCTACACTGGTCAAGGAGACAAAACGAAATGCTTTTTCTGTGACGGTGG 9483
Query 13319 ATTGAAAGATTGGGAGCCGGAAGATGTACCTTGGGAACAGCATGTAAGATGGTTCGACCG 13378
||||| || ||||| || ||| | || ||||| || |||| | | |||||||| ||
Sbjct 9482 TTTGAAGGACTGGGAAAATGACGATATTCCCTGGGAGCAACATGCACGTTGGTTCGATCG 9423
Query 13379 TTGCGCCTACGTTCAGCTAGTCAAGGGTAGAGACTACGTACAGAAAGTCATCACGGAAGC 13438
|| |||||||| || || ||||| || |||| || ||||| || || || |||||||
Sbjct 9422 ATGTGCCTACGTCCAACTTGTCAAAGGACGAGAGTATGTACAAAAGGTTATATCGGAAGC 9363
Query 13439 CTG 13441
||
Sbjct 9362 GTG 9360
>seq4146
Length=100757
Score = 136 bits (150), Expect = 3e-27
Identities = 621/974 (64%), Gaps = 17/974 (2%)
Strand=Plus/Plus
Query 6369 CAATCTCCCTGTAGTCCACCACACCCTCCTCCCAAGTGCCTTTCACTTTACCCGTCGCCA 6428
||||||| |||||||| |||||||| |||| ||| || ||||| ||| || || |
Sbjct 15659 CAATCTCTCTGTAGTCGACCACACCATCCTGCCAGGTCCCTTTACAAGGACCTGTGGCTA 15718
Query 6429 CCCCACTAAACAGATTGTTGTTCGTGTAATTCGTCACACCCGACCACCCCCTGCCGTACA 6488
| ||| | || |||| || | ||||| || || || | ||| || | || ||||
Sbjct 15719 CTCCAGTGAAAGGATTATTATCTGTGTAGTTTTGGACTCCAGTCCAACCACGACCATACA 15778
Query 6489 TAGCCACCCCCACCACCAACTTGCCACTGTTCACACTCTGGTTCAACAAACGCCTCAACG 6548
| || || || || | | ||| | ||| || | ||| || | | |
Sbjct 15779 TCGCTACACCAACTATAATCTTCTTAGGGTTGACTCCTTGGGCTAAGAGGTTTTTAACTC 15838
Query 6549 CAAAGTCTGTGGTGTAGTTTTCGTGGGTTTTCCACGACGGTGGATACAGAGGTGCGTGGT 6608
||||||| || |||||| |||| | | ||||| | |||| |||| |||| || |
Sbjct 15839 CAAAGTCAGTTGTGTAGGTTTCCTTTGGATTCCATGCAGGTGCGTACAACGGTGTTTGAT 15898
Query 6609 AGCCCAGATCCGTCATC-GACCACGCACCCTTGTAATCGTAGTTCATCACGAAAATGTAG 6667
|| ||| ||||| |||||||| || || | ||||| |||| | ||| || |
Sbjct 15899 GTCCAAGAGT-GTCATTTGACCACGCTCCTTTAAAGTCGTAACTCATTAAGAAGATATGA 15957
Query 6668 TCGAGATACTGTTGGCACTGTTTGTAGTCGACCACGTCTATCTTGTCGTAACCACCGCTG 6727
|| | ||| || || | ||||||| || || | || || || ||||| | ||
Sbjct 15958 TCCATATATTGCTGAGCTTTCCTGTAGTCAACTACTTGGATTTTATCCCAACCAGCACTA 16017
Query 6728 ATGGCGCTCGTCAACTGCAATCTCCGGCCCGTCTTCTCCTCCAGCTCGTCCAACATTTGT 6787
|| ||| |||| | || || || |||| | | ||||| || |||||
Sbjct 16018 ATAGCGGATGTCAGTTCATATTTCTTACCAGTCTCTGCGGATAACTCGTTCAGCATTTCA 16077
Query 6788 CTCAAATCGCTCAGCAGCTGTACATAGGTGTACTTGTCGGTG-TCAGCATCGCCCAACTT 6846
| || || ||| ||||| || || |||| | || | | | || | ||
Sbjct 16078 CGTAACTCTTTCATAAGCTGGACGTAA----ACTTCACCGTCATTTGGTCCACCGAGGTT 16133
Query 6847 GTCGTTCGCTCCCTTTCCTCCCGGAAACTCCCAGTCAATATCCACTCCGTCGAAAAACTT 6906
|| || || ||||| || || |||||||| ||||| || || || ||||| || ||
Sbjct 16134 AGGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTT 16193
Query 6907 CCACGTCTCCAGAAACTCGCGCACGCTCTGCACAAACACCCGA---CGCTTGGCGGAGTC 6963
||| || | || || || ||| |||||| ||| | || | ||
Sbjct 16194 CCAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAA---CGATCTCTTTTTACCTTATC 16250
Query 6964 GTGCATCTTGTAGAAGGGGTCGCTAAGCGTCCACCCGCCTATGGAGGGTAGTATAGTCAG 7023
| | |||||| || || || ||||| || || || || || || | |||
Sbjct 16251 ATCAAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAA 16310
Query 7024 ATTGGGGTTGTGGTGTTTGATGGCCATCAGCTGGCCAAAATTACCCTTATACGGCTCGTC 7083
|| || | ||||| | | |||||| || ||||| || || || || || ||||
Sbjct 16311 ATCAGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTT 16370
Query 7084 GTACGCCTCCACACCCTTTTGTGGTTTCTGTACGGCGCCCCACAAATCGTGTATACTCAC 7143
| | || |||||| |||||||| |||| || |||| || || ||| ||
Sbjct 16371 CCAGGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAAC 16430
Query 7144 TTTGAAATCGTCTCGGCCCGC-GCACGATCTTTGCAACGCTTC-AAACGACCCCGGCACC 7201
|||||| || ||||| ||||| ||| ||||||||||| |||| |||| || | |
Sbjct 16431 TTTGAAGTCCTCTCG-CCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCG-ATT 16488
Query 7202 TGTTTCAAGGCGTCGTTGAGTCCGTCTCCCCCGCAAATGGGCACAAATCCGTACAGCAAA 7261
| ||| || |||||| | |||||| || || || ||||| | ||||||||| || | |
Sbjct 16489 TCTTTTAAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGA 16548
Query 7262 TGGCTGAGATTGGGCACGGGCACCTTGTCTGCGGGAAACTGCCGTCCGTACACACCCCAC 7321
|| | ||||| || | ||| ||||| ||| | || || | | ||| |||||||||
Sbjct 16549 TGTGTAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCAC 16608
Query 7322 TCCACAAAGTACGC 7335
|||||||| || ||
Sbjct 16609 TCCACAAAATAAGC 16622
>seq3626
Length=201135
Score = 100 bits (110), Expect = 2e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||| || | |||||||||||| ||||| ||||| ||||||||||| ||
Sbjct 59291 CCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAG 59232
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| ||| | || || || ||||| || ||||| || | ||||| || ||||||||
Sbjct 59231 AGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGG 59172
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| || |||||| |||||| || || | | | ||| ||| |||
Sbjct 59171 ATACCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTCAACC 59112
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCC 45342
|||| ||| || || || || || || |||||||| || || ||||| || ||
Sbjct 59111 TCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCATTTTTCC 59059
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||||| | | |||||||||||||| ||| ||||| |||||||| |||||
Sbjct 60204 GCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGA 60145
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || | || |||||||| ||||| || || || | ||||||||||| |||||
Sbjct 60144 AAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGG 60085
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| || ||||||||| ||||| || || | | | |||| | || ||
Sbjct 60084 GATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAAC 60025
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||||| ||||| || || |||||||| |||||||| |||||
Sbjct 60024 TTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||| || | | ||| | ||| || ||| ||| || |||||||||||||| |
Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || |||| ||||||||| || || || | ||||||||||| |||||
Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||||||| ||||| || || | | | |||| | || ||
Sbjct 59627 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59568
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| ||||| ||||| || || |||||||| |||||||| |||||
Sbjct 59567 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||| || | | || | ||| || ||| ||| || |||||||||||||| |
Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || |||||||||||||| || || || | ||||||||||| |||||
Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||||||| ||||| || || | | | |||| | || ||
Sbjct 59855 ATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59796
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| ||||| ||||| || || |||||||| |||||||| |||||
Sbjct 59795 TCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749
>seq2492
Length=83244
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| | |||||| || || ||| || || || || ||||||||
Sbjct 41230 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAG 41289
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| ||| | || || || || || ||||| || || | || ||| ||||| || ||
Sbjct 41290 AGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41349
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||| ||||| |||||| |||||| | | ||||| ||| ||
Sbjct 41350 ATACCCTCTTTGTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACT 41409
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||||| || ||||| |||| ||||| ||||| || |||||
Sbjct 41410 TCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| | |||||| || || ||| || ||||| || ||||||||
Sbjct 40318 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAG 40377
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| |||| | || || || || || ||||| || || | || ||| ||||| || ||
Sbjct 40378 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40437
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAAC 45261
| |||||| ||||| ||||| ||||||
Sbjct 40438 ATACCCTCTTTGTCTTGGATTTTGGCCTTAAC 40469
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| | |||||| || || ||| || || || || ||||||||
Sbjct 40774 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40833
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| |||| | || || || || |||||||| || || | || ||| ||||| || ||
Sbjct 40834 AGTGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40893
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAAC 45261
| |||||| ||||| ||||| ||||||
Sbjct 40894 ATACCCTCTTTGTCTTGGATTTTGGCCTTAAC 40925
Score = 82.4 bits (90), Expect = 6e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| | |||||| || || ||| || ||||| || ||||||||
Sbjct 41458 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAG 41517
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| ||| | || || || || || ||||| || || | || ||| ||||| || ||
Sbjct 41518 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41577
Query 45230 ACACCCTCCTTGTCCGCAATTTT 45252
| |||||| ||||| ||||||
Sbjct 41578 ATACCCTCTTTGTCTTGAATTTT 41600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394880872262539
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