Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq409 122 8e-23 >seq409 Length=488447 Score = 122 bits (134), Expect = 8e-23 Identities = 163/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 |||||||||| ||||| || || ||||| || || || ||||| | ||| || || Sbjct 75177 CCTCATCTCTTGATATAAGCTCATTACTGAAA--GTCAAGCCAGGCATGAGTCCACGCTT 75234 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||||||||||| || | ||| || || || || || || ||||| || || ||||| Sbjct 75235 CTTTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAA 75294 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 ||||| | ||||||||||||| || ||||| | | ||||||| | ||||| || Sbjct 75295 TGCTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCAATCCATTGTAGTGCCCAGTC 75354 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || ||||||| | || || ||||| |||||||||||||| Sbjct 75355 CGCCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAA 75399 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 ||||||||| ||||| | || |||||||||||||| | |||||||||||||| || Sbjct 76209 AATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTTG 76268 Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592 || ||||| || |||| || || | ||| |||||| |||| | || | | Sbjct 76269 GAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTAG 76328 Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14652 ||||||||| || || |||||| || ||||||||||| | | || ||| || || | Sbjct 76329 ATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTTATGAAATG 76388 Query 14653 TTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCT 14693 | ||| || | | ||| |||||| | |||||||| Sbjct 76389 TCTCTCACAATCCTTTAAACTTTCCCAATCCGGTAAATCCT 76429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482102262674120