Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq4146 260 1e-64 seq688 111 1e-19 seq2492 102 6e-17 seq3626 93.3 3e-14 >seq4146 Length=100757 Score = 260 bits (288), Expect = 1e-64 Identities = 698/1058 (66%), Gaps = 18/1058 (2%) Strand=Plus/Plus Query 90991 TAGTCAACGACTCCATCTTCCCACGTGCCCGTAACCGGACCGTTAGCGACACCATCAAAA 91050 ||||| || || ||||| | ||| || || || ||||| | || || ||| ||| Sbjct 15670 TAGTCGACCACACCATCCTGCCAGGTCCCTTTACAAGGACCTGTGGCTACTCCAGTGAAA 15729 Query 91051 TAGTTATCACCTTTGTAATCAGACACGCCTGTCCAGCCGCGCCCGTACATGGCGACACCA 91110 |||| | || |||| | || || ||||| || || || ||||| || |||||| Sbjct 15730 GGATTATTATCTGTGTAGTTTTGGACTCCAGTCCAACCACGACCATACATCGCTACACCA 15789 Query 91111 ATAATTATTTTACTAGAATCAACACCTTGTTTTGTGAGCATTTGCACGGCATGATGCGTG 91170 | || || || ||| | || ||||| | ||| ||| || || | || Sbjct 15790 ACTATAATCTTCTTAGGGTTGACTCCTTGGGCTAAGAGGTTTTTAACTCCAAAGTCAGTT 15849 Query 91171 GTGTACAACTCGTTCGGGTTCCATTGCGGGGCGTATAGTGTCGTTTGATAGCCCAAATCG 91230 ||||| || || || |||||| || ||||| | | ||||||| || | | | Sbjct 15850 GTGTAGGTTTCCTTTGGATTCCATGCAGGTGCGTACAACGGTGTTTGATGTCCAAGAGTG 15909 Query 91231 GTATTTGACCAAGCTCCTTTAAAATCGTAAGTCATGACATATATTTTACTCAAAAACTTT 91290 ||||||||| ||||||||||| |||||| |||| | | || | | || | | | Sbjct 15910 TCATTTGACCACGCTCCTTTAAAGTCGTAACTCATTAAGAAGATATGATCCATATATTGC 15969 Query 91291 TGTGCAGCGTCATAATCGACAAGTTCGATCTTGTCATAACCGGCACCGATTGCGCTTGTC 91350 || || || || || | || ||| || || |||| |||| || ||| |||| Sbjct 15970 TGAGCTTTCCTGTAGTCAACTACTTGGATTTTATCCCAACCAGCACTAATAGCGGATGTC 16029 Query 91351 AATTCGTACACTTTACCTGTTTGTGCTTGCAAATCATCCAACATGTCACGCAACTCTTTT 91410 | ||| || ||||| || | ||| || || | || ||| ||||| |||||||| Sbjct 16030 AGTTCATATTTCTTACCAGTCTCTGCGGATAACTCGTTCAGCATTTCACGTAACTCTTTC 16089 Query 91411 AGCAAAACAATGTATGTAGCAGCGTCGC-GT--TTCGGATCGCCAATGGCCGGATTAGCG 91467 | || | || | ||| | | || | || || || | || | | |||||||| Sbjct 16090 AT--AAGC--TGGACGTA--AACTTCACCGTCATTTGGTCCACCGAGGTTAGGATTAGCA 16143 Query 91468 CCTTTACCGCCCGGAAATTCCCAATCAATATCTACACCGTCAAAAAATTTCCAAACTTGC 91527 ||||| || || || || ||||||||||| || ||||| || || ||||||||| ||| Sbjct 16144 CCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTCCAAGTTTGG 16203 Query 91528 AAAAATTCTTTAACCGAATCAACGAACACGTTTCTTCGTTTGAC---ATCGTGCATAAAA 91584 | || ||||| || || | || || ||| | || ||| || ||| | | ||| Sbjct 16204 AGGAAGTCTTTCACTGATGCCACAAA-ACGATC--TCTTTTTACCTTATCATCAAAAAAG 16260 Query 91585 TAGAACGGGTCCGACAAAGTCCAGCCACCGATGGACGGTAAAACTTTTAAATGCGGGTTG 91644 ||||| || || | || |||||||| ||||| || || | ||| || |||| || | Sbjct 16261 TAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATCAGGTCTA 16320 Query 91645 GCCAACTTGGCGGCCATTATCTGACCAAAGTTGCCCTTGTAAGGCTCGTTCCAAGCGGAT 91704 || || | ||| | || ||||||||||| |||||||| |||||||| | ||| Sbjct 16321 GCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCAGGAGGAC 16380 Query 91705 ACACCTTTTTGTGGTTTTTGTATGGCTGCCCACGGATCGTGTATGGAAACTTTAAAATCA 91764 | ||| || ||||||||||||| |||||||| || || || || |||||||| || || Sbjct 16381 AAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTTGAAGTCC 16440 Query 91765 TCGCGTCCTTTGCACGATCGTTGCAAATTTTCAAAACTACCAGGTATTGTTTTGAGGGCA 91824 || || || |||| |||| ||||||| || ||||| || ||| ||| | Sbjct 16441 TCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTCTTTTAAACTG 16500 Query 91825 TCGTTTAATCCATCGCCTCCGCAAATGGGTATAAAACCGTACAACAGATGGGACAAATTT 91884 ||||| | ||| || || || || ||||| ||||| ||||| | ||||| | | |||| Sbjct 16501 TCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGATGTGTAAGATTT 16560 Query 91885 GGCAGCGGCACCTTGTCGATTGGAAAGTTGCGTCCGTACACGCCCCATTCAACAAAGTAC 91944 || | || ||||| || | ||| || || | ||| || ||||| || ||||| || Sbjct 16561 GGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCACAAAATAA 16620 Query 91945 G---CGGCGACGGTCGCGTTATTGCGTCTACCAGGTTTGTTGTTTTCTCGCCAAACATAT 92001 | || |||| || | | | || || ||| ||||| || ||| | || | | Sbjct 16621 GCTCCGACGACTTTCCCTGAAGTTTGTTTAAAAGGCTTGTTTTTCTCTAGAAAACTAAAG 16680 Query 92002 TCTAGCGGAGTCAAATGACCACCGTCAGTGTCAGCGAC 92039 ||||| || | | ||| | ||| ||||| || || || Sbjct 16681 TCTAGAGGTGGTAGATGGCTACCATCAGTATCTGCTAC 16718 >seq688 Length=109112 Score = 111 bits (122), Expect = 1e-19 Identities = 174/249 (70%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 20098 AACATTTTGCACATAATCACGCCCTTTGACAAGCAGCAAGTATCCACAGTTACTAAACCA 20157 ||| ||||| ||||| || || ||||||||||| | | ||| |||| | ||||| Sbjct 9374 AACCTTTTGTACATACTCTCGTCCTTTGACAAGTTGGACGTAGGCACATCGATCGAACCA 9433 Query 20158 ACGTGCGTGTTGTTCCCATGGAATGTCATCATTTTCCCAATCTTTAAGGCCGCCATTGCA 20217 |||||| ||||| ||||| ||||| || ||||||||||| || || | || || | || Sbjct 9434 ACGTGCATGTTGCTCCCAGGGAATATCGTCATTTTCCCAGTCCTTCAAACCACCGTCACA 9493 Query 20218 ATAAAAACACAAAGTTTTATCACCGCGCGACGTATAATAAAATCCCGCTTCGGCCAATTC 20277 |||| || ||||| || || | || || | || || |||||||| | || Sbjct 9494 GAAAAAGCATTTCGTTTTGTCTCCTTGACCAGTGTAGAAGAAACCAGCTTCGGCTAGCTC 9553 Query 20278 ATCGGGCCTTTGCTTCATGCTGCGCGGCCACCCTTCAAAAGTTTTTAAACGCGCAGCTTC 20337 || ||| |||| ||| ||||| ||||| | |||| || | ||| |||||||| Sbjct 9554 CTCAGGCTTTTGTCGCATACTGCGAGGCCAATCGACAAATGTACGGAGACGGGCAGCTTC 9613 Query 20338 TGATGCATA 20346 |||||||| Sbjct 9614 GGATGCATA 9622 Score = 102 bits (112), Expect = 6e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 20411 AAAGGACAATGCGGTGCCCATTTTTGGTGATCTTTCGCCGGGTCGTCGCCTTCTTGCCAA 20470 || ||||| || |||||||| |||| |||||| || || ||||| ||||| ||| Sbjct 9750 AATGGACATTGGGGTGCCCACCTTTGATGATCTACAGCAGGATCGTCCCCTTCCACCCAT 9809 Query 20471 TGCATAATTTCCACTTTGCAAAACGCACAGCGCACTTCGTCAGCGCGCCCCAAATAATAG 20530 ||| ||||| |||||||| || |||||||||||||| || | || || | ||| ||| Sbjct 9810 CTCATGATTTCGACTTTGCAGAAAGCACAGCGCACTTCATCGCCCCGGCCTAGATAGTAG 9869 Query 20531 AACCCGTTGGTCGCCATTTGCTCAGGTGTTAAAAATGTTACGGGCCAGTTTACAAAAGT 20589 || ||||| | || | | ||||| || | ||||| || ||||| || | ||||| Sbjct 9870 AATCCGTTTTTAGCTAAGCGTTCAGGAGTGATAAATGAAACAGGCCACTTATCGAAAGT 9928 >seq2492 Length=83244 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| || Sbjct 41241 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAGAGTGTACGACC 41300 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | || ||||| ||| |||| || || || || || || | || || || Sbjct 41301 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 41360 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||||| ||| || | | ||| |||||| ||||| ||||| || || Sbjct 41361 GTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGAGTAAT 41420 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||||| ||||| || || |||||||| ||||| Sbjct 41421 GGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| || Sbjct 41013 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTGCGACC 41072 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | || ||||| ||| |||| || || || || || || | || || || Sbjct 41073 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 41132 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| ||| || | | ||| |||||| ||||| ||||| ||||| Sbjct 41133 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACTTCAAGAGTGAT 41192 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||||| ||||| || || || ||||| ||||| Sbjct 41193 GGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| | Sbjct 40557 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGGCC 40616 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | || ||||| ||| |||| || || || || || || | || || || Sbjct 40617 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40676 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| ||| || | | ||| |||||| ||||| ||||| ||||| Sbjct 40677 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAACTTCAAGAGTGAT 40736 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||||| ||||| || || || ||||| ||||| Sbjct 40737 GGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| || Sbjct 40785 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGACC 40844 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | || || || ||| |||| || || || || || || | || || || Sbjct 40845 ATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40904 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| ||| || | | ||| |||||| ||||| ||||| ||||| Sbjct 40905 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGTGTGAT 40964 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||||| || || || ||||| ||||| ||||| Sbjct 40965 GGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| || Sbjct 41697 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAGAGTGTGCGACC 41756 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | || || || ||| ||||||| || || || || || | || || || Sbjct 41757 ATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCGGGATACCCTCTTT 41816 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| ||| || | | ||| |||||| || || || | ||| || Sbjct 41817 GTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTACCTCTAGGGTAAT 41876 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||||||||| | || ||||||||||| ||||| || Sbjct 41877 AGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTT 41915 >seq3626 Length=201135 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | |||||| || || |||||||||||||||||||| | || ||| | |||| Sbjct 59732 AGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59673 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||||||||| || ||| |||| |||| ||||| || || | ||||||||| || Sbjct 59672 TCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTC 59614 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | |||||| || || |||||||||||||||||||| | || ||| | |||| Sbjct 59960 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59901 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 |||| |||||| || ||| |||| |||| ||||| || || | ||||||||| || Sbjct 59900 TCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTC 59842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379157410051455