Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 260 1e-64
seq688 111 1e-19
seq2492 102 6e-17
seq3626 93.3 3e-14
>seq4146
Length=100757
Score = 260 bits (288), Expect = 1e-64
Identities = 698/1058 (66%), Gaps = 18/1058 (2%)
Strand=Plus/Plus
Query 90991 TAGTCAACGACTCCATCTTCCCACGTGCCCGTAACCGGACCGTTAGCGACACCATCAAAA 91050
||||| || || ||||| | ||| || || || ||||| | || || ||| |||
Sbjct 15670 TAGTCGACCACACCATCCTGCCAGGTCCCTTTACAAGGACCTGTGGCTACTCCAGTGAAA 15729
Query 91051 TAGTTATCACCTTTGTAATCAGACACGCCTGTCCAGCCGCGCCCGTACATGGCGACACCA 91110
|||| | || |||| | || || ||||| || || || ||||| || ||||||
Sbjct 15730 GGATTATTATCTGTGTAGTTTTGGACTCCAGTCCAACCACGACCATACATCGCTACACCA 15789
Query 91111 ATAATTATTTTACTAGAATCAACACCTTGTTTTGTGAGCATTTGCACGGCATGATGCGTG 91170
| || || || ||| | || ||||| | ||| ||| || || | ||
Sbjct 15790 ACTATAATCTTCTTAGGGTTGACTCCTTGGGCTAAGAGGTTTTTAACTCCAAAGTCAGTT 15849
Query 91171 GTGTACAACTCGTTCGGGTTCCATTGCGGGGCGTATAGTGTCGTTTGATAGCCCAAATCG 91230
||||| || || || |||||| || ||||| | | ||||||| || | | |
Sbjct 15850 GTGTAGGTTTCCTTTGGATTCCATGCAGGTGCGTACAACGGTGTTTGATGTCCAAGAGTG 15909
Query 91231 GTATTTGACCAAGCTCCTTTAAAATCGTAAGTCATGACATATATTTTACTCAAAAACTTT 91290
||||||||| ||||||||||| |||||| |||| | | || | | || | | |
Sbjct 15910 TCATTTGACCACGCTCCTTTAAAGTCGTAACTCATTAAGAAGATATGATCCATATATTGC 15969
Query 91291 TGTGCAGCGTCATAATCGACAAGTTCGATCTTGTCATAACCGGCACCGATTGCGCTTGTC 91350
|| || || || || | || ||| || || |||| |||| || ||| ||||
Sbjct 15970 TGAGCTTTCCTGTAGTCAACTACTTGGATTTTATCCCAACCAGCACTAATAGCGGATGTC 16029
Query 91351 AATTCGTACACTTTACCTGTTTGTGCTTGCAAATCATCCAACATGTCACGCAACTCTTTT 91410
| ||| || ||||| || | ||| || || | || ||| ||||| ||||||||
Sbjct 16030 AGTTCATATTTCTTACCAGTCTCTGCGGATAACTCGTTCAGCATTTCACGTAACTCTTTC 16089
Query 91411 AGCAAAACAATGTATGTAGCAGCGTCGC-GT--TTCGGATCGCCAATGGCCGGATTAGCG 91467
| || | || | ||| | | || | || || || | || | | ||||||||
Sbjct 16090 AT--AAGC--TGGACGTA--AACTTCACCGTCATTTGGTCCACCGAGGTTAGGATTAGCA 16143
Query 91468 CCTTTACCGCCCGGAAATTCCCAATCAATATCTACACCGTCAAAAAATTTCCAAACTTGC 91527
||||| || || || || ||||||||||| || ||||| || || ||||||||| |||
Sbjct 16144 CCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTCCAAGTTTGG 16203
Query 91528 AAAAATTCTTTAACCGAATCAACGAACACGTTTCTTCGTTTGAC---ATCGTGCATAAAA 91584
| || ||||| || || | || || ||| | || ||| || ||| | | |||
Sbjct 16204 AGGAAGTCTTTCACTGATGCCACAAA-ACGATC--TCTTTTTACCTTATCATCAAAAAAG 16260
Query 91585 TAGAACGGGTCCGACAAAGTCCAGCCACCGATGGACGGTAAAACTTTTAAATGCGGGTTG 91644
||||| || || | || |||||||| ||||| || || | ||| || |||| || |
Sbjct 16261 TAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATCAGGTCTA 16320
Query 91645 GCCAACTTGGCGGCCATTATCTGACCAAAGTTGCCCTTGTAAGGCTCGTTCCAAGCGGAT 91704
|| || | ||| | || ||||||||||| |||||||| |||||||| | |||
Sbjct 16321 GCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCAGGAGGAC 16380
Query 91705 ACACCTTTTTGTGGTTTTTGTATGGCTGCCCACGGATCGTGTATGGAAACTTTAAAATCA 91764
| ||| || ||||||||||||| |||||||| || || || || |||||||| || ||
Sbjct 16381 AAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTTGAAGTCC 16440
Query 91765 TCGCGTCCTTTGCACGATCGTTGCAAATTTTCAAAACTACCAGGTATTGTTTTGAGGGCA 91824
|| || || |||| |||| ||||||| || ||||| || ||| ||| |
Sbjct 16441 TCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTCTTTTAAACTG 16500
Query 91825 TCGTTTAATCCATCGCCTCCGCAAATGGGTATAAAACCGTACAACAGATGGGACAAATTT 91884
||||| | ||| || || || || ||||| ||||| ||||| | ||||| | | ||||
Sbjct 16501 TCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGATGTGTAAGATTT 16560
Query 91885 GGCAGCGGCACCTTGTCGATTGGAAAGTTGCGTCCGTACACGCCCCATTCAACAAAGTAC 91944
|| | || ||||| || | ||| || || | ||| || ||||| || ||||| ||
Sbjct 16561 GGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCACAAAATAA 16620
Query 91945 G---CGGCGACGGTCGCGTTATTGCGTCTACCAGGTTTGTTGTTTTCTCGCCAAACATAT 92001
| || |||| || | | | || || ||| ||||| || ||| | || | |
Sbjct 16621 GCTCCGACGACTTTCCCTGAAGTTTGTTTAAAAGGCTTGTTTTTCTCTAGAAAACTAAAG 16680
Query 92002 TCTAGCGGAGTCAAATGACCACCGTCAGTGTCAGCGAC 92039
||||| || | | ||| | ||| ||||| || || ||
Sbjct 16681 TCTAGAGGTGGTAGATGGCTACCATCAGTATCTGCTAC 16718
>seq688
Length=109112
Score = 111 bits (122), Expect = 1e-19
Identities = 174/249 (70%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 20098 AACATTTTGCACATAATCACGCCCTTTGACAAGCAGCAAGTATCCACAGTTACTAAACCA 20157
||| ||||| ||||| || || ||||||||||| | | ||| |||| | |||||
Sbjct 9374 AACCTTTTGTACATACTCTCGTCCTTTGACAAGTTGGACGTAGGCACATCGATCGAACCA 9433
Query 20158 ACGTGCGTGTTGTTCCCATGGAATGTCATCATTTTCCCAATCTTTAAGGCCGCCATTGCA 20217
|||||| ||||| ||||| ||||| || ||||||||||| || || | || || | ||
Sbjct 9434 ACGTGCATGTTGCTCCCAGGGAATATCGTCATTTTCCCAGTCCTTCAAACCACCGTCACA 9493
Query 20218 ATAAAAACACAAAGTTTTATCACCGCGCGACGTATAATAAAATCCCGCTTCGGCCAATTC 20277
|||| || ||||| || || | || || | || || |||||||| | ||
Sbjct 9494 GAAAAAGCATTTCGTTTTGTCTCCTTGACCAGTGTAGAAGAAACCAGCTTCGGCTAGCTC 9553
Query 20278 ATCGGGCCTTTGCTTCATGCTGCGCGGCCACCCTTCAAAAGTTTTTAAACGCGCAGCTTC 20337
|| ||| |||| ||| ||||| ||||| | |||| || | ||| ||||||||
Sbjct 9554 CTCAGGCTTTTGTCGCATACTGCGAGGCCAATCGACAAATGTACGGAGACGGGCAGCTTC 9613
Query 20338 TGATGCATA 20346
||||||||
Sbjct 9614 GGATGCATA 9622
Score = 102 bits (112), Expect = 6e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 20411 AAAGGACAATGCGGTGCCCATTTTTGGTGATCTTTCGCCGGGTCGTCGCCTTCTTGCCAA 20470
|| ||||| || |||||||| |||| |||||| || || ||||| ||||| |||
Sbjct 9750 AATGGACATTGGGGTGCCCACCTTTGATGATCTACAGCAGGATCGTCCCCTTCCACCCAT 9809
Query 20471 TGCATAATTTCCACTTTGCAAAACGCACAGCGCACTTCGTCAGCGCGCCCCAAATAATAG 20530
||| ||||| |||||||| || |||||||||||||| || | || || | ||| |||
Sbjct 9810 CTCATGATTTCGACTTTGCAGAAAGCACAGCGCACTTCATCGCCCCGGCCTAGATAGTAG 9869
Query 20531 AACCCGTTGGTCGCCATTTGCTCAGGTGTTAAAAATGTTACGGGCCAGTTTACAAAAGT 20589
|| ||||| | || | | ||||| || | ||||| || ||||| || | |||||
Sbjct 9870 AATCCGTTTTTAGCTAAGCGTTCAGGAGTGATAAATGAAACAGGCCACTTATCGAAAGT 9928
>seq2492
Length=83244
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| ||
Sbjct 41241 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAGAGTGTACGACC 41300
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||| | || ||||| ||| |||| || || || || || || | || || ||
Sbjct 41301 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 41360
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| ||||| ||| || | | ||| |||||| ||||| ||||| || ||
Sbjct 41361 GTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGAGTAAT 41420
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| ||||||| ||||| || || |||||||| |||||
Sbjct 41421 GGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| ||
Sbjct 41013 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTGCGACC 41072
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||| | || ||||| ||| |||| || || || || || || | || || ||
Sbjct 41073 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 41132
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| |||| ||| || | | ||| |||||| ||||| ||||| |||||
Sbjct 41133 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACTTCAAGAGTGAT 41192
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| ||||||| ||||| || || || ||||| |||||
Sbjct 41193 GGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| |
Sbjct 40557 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGGCC 40616
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||| | || ||||| ||| |||| || || || || || || | || || ||
Sbjct 40617 ATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40676
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| |||| ||| || | | ||| |||||| ||||| ||||| |||||
Sbjct 40677 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAACTTCAAGAGTGAT 40736
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| ||||||| ||||| || || || ||||| |||||
Sbjct 40737 GGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| ||
Sbjct 40785 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGACC 40844
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||| | || || || ||| |||| || || || || || || | || || ||
Sbjct 40845 ATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40904
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| |||| ||| || | | ||| |||||| ||||| ||||| |||||
Sbjct 40905 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGTGTGAT 40964
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| ||||||| || || || ||||| ||||| |||||
Sbjct 40965 GGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| || ||||| ||||||||||| || |||||||| | | ||| ||
Sbjct 41697 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAGAGTGTGCGACC 41756
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|||||| | || || || ||| ||||||| || || || || || | || || ||
Sbjct 41757 ATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCGGGATACCCTCTTT 41816
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| |||| ||| || | | ||| |||||| || || || | ||| ||
Sbjct 41817 GTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTACCTCTAGGGTAAT 41876
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|||||||||| | || ||||||||||| ||||| ||
Sbjct 41877 AGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTT 41915
>seq3626
Length=201135
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||| | |||||| || || |||||||||||||||||||| | || ||| | ||||
Sbjct 59732 AGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59673
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
||||||||||| || ||| |||| |||| ||||| || || | ||||||||| ||
Sbjct 59672 TCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTC 59614
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | |||||| || || |||||||||||||||||||| | || ||| | ||||
Sbjct 59960 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59901
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
|||| |||||| || ||| |||| |||| ||||| || || | ||||||||| ||
Sbjct 59900 TCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTC 59842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379157410051455
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