Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 275 5e-69
seq4182 93.3 4e-14
>seq4146
Length=100757
Score = 275 bits (304), Expect = 5e-69
Identities = 663/986 (67%), Gaps = 33/986 (3%)
Strand=Plus/Plus
Query 35873 TTAGCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACG 35932
|| ||||||| ||||||||||||||| || | | ||| || || | || || |
Sbjct 15655 TTTGCAATCTCTCTGTAGTCGACCACACCATCCTGCCAGGTCCCTTTACAAGGACCTGTG 15714
Query 35933 GCTACGCCACTGAATGGATTGTCA-CTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCC 35991
||||| ||| |||| ||||| | | |||| |||||| ||||| || |||||||| || ||
Sbjct 15715 GCTACTCCAGTGAAAGGATTATTATCTGT-GTAGTTTTGGACTCCAGTCCAACCACGACC 15773
Query 35992 GTACATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTC 36051
||||| ||||| || | | | || || || || |||| ||| || | | |
Sbjct 15774 ATACATCGCTACACCAACTATAATCTTCTTAGGGTTGACTCCTTGGGCTAAGAGGTTTTT 15833
Query 36052 CACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGT 36111
|| | | || | ||||| | ||| || || ||||| || | |||||| | ||
Sbjct 15834 AACTCCAAAGTCAGTTGTGTAGGTTTCCTTTGGATTCCATGCAGGTGCGTACAACGGTGT 15893
Query 36112 CTGATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAAT 36171
||||| || ||| | ||| ||||| |||||||| || || |||||||| | ||| ||
Sbjct 15894 TTGATGTCCAAGAGTGTCATTTGACCACGCTCCTTTAAAGTCGTAACTCATTAAGAAGAT 15953
Query 36172 TTTATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGC 36231
| ||| | ||| || || ||| ||| | ||| | ||| || || |||||
Sbjct 15954 ATGATCCATATATTGCTGAGCTTTCCTGTAGTCAACTACTTGGATTTTATCCCAACCAGC 16013
Query 36232 GCTAATCGCTGTGGTGAGTTCTAAAGT---ACGATTCGTTTGTATTTGAACTTGATCGAG 36288
||||| || | || ||||| | | || | || | || | |||| | || ||
Sbjct 16014 ACTAATAGCGGATGTCAGTTCATATTTCTTACCAGTC-TCTGCGGAT-AACTCGTTC-AG 16070
Query 36289 CATGGCGCGCAATTCGCCCAATAAAGC--GA--TATACGT----GTTATTGTCGCGTTCC 36340
||| | || || || || |||| || || || | || ||| | |||
Sbjct 16071 CATTTCACGTAACTCTTTCAT--AAGCTGGACGTAAACTTCACCGTCATTT----GGTCC 16124
Query 36341 ACATCGCCAACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATG 36400
|| | | ||| ||||| || ||||| || || || || ||||||||||| || |
Sbjct 16125 AC-----CGAGGTTAGGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACA 16179
Query 36401 CCGTCGAAAAATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGC 36460
|| ||||| |||||||| || | || || ||| ||| | |||||| | ||
Sbjct 16180 CCATCGAAGAATTTCCAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTT 16239
Query 36461 GTTCGCGCATCGTGCATATGATAGAAGGGATCGGACAGTGTCCAACCGCCGATTGATGCC 36520
|| | ||| | | | ||||| ||||| | ||||||||| || ||||||||||
Sbjct 16240 TTTACCTTATCATCAAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGA 16299
Query 36521 AACACTTTTAGATTGGGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTG 36580
| || || | || || | || ||| | ||| | ||| ||||| |||||||||
Sbjct 16300 AGAACCTTCAAATCAGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTG 16359
Query 36581 TAGGGTTCGTTCCATGCG--CTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGAT 36638
|| ||||||||||| | | | ||| ||| | ||||||||||| | || ||||| || |
Sbjct 16360 TAAGGTTCGTTCCAGGAGGACAAAC-CCT-TCTGTGGTTTTTGTAAAGCTGCCCAAGGGT 16417
Query 36639 CGTGTATGGAAACTTTAAAATTGTCCCTGCCAGC-GCACGATCTTTGCAACGCTTCAAAA 36697
| || || |||||||| || | || | ||| || ||| ||||||||||| |||| |||
Sbjct 16418 CATGGATAGAAACTTTGAAGTCCTCTC-GCCCGCTGCAAGATCTTTGCAAAGCTTGGAAA 16476
Query 36698 CTCCCCGTGATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAAT 36757
|| || ||| ||||||||||||||| || ||||||||||| || || || ||||||
Sbjct 16477 CTTCCTTCGATTTCTTTTAAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAAT 16536
Query 36758 CCGTATAAAATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCG 36817
||||| | || || | ||| || || |||| || || || || || || || | |
Sbjct 16537 CCGTAAAGAAGATGTGTAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGG 16596
Query 36818 TAAACGCCCCATTCGACAAAATAGGC 36843
||||| ||||| || |||||||| ||
Sbjct 16597 TAAACACCCCACTCCACAAAATAAGC 16622
>seq4182
Length=188933
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||||||||| || |||||| | || || ||||| || ||| |||| || || | |
Sbjct 74498 ATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGCTTCC 74439
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|| | | | |||| ||| || | |||||| | |||||||| | || || |||
Sbjct 74438 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGATCAG 74379
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|||||||| || | ||| || ||||| ||||||||| | || | ||| ||||
Sbjct 74378 CAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTACAAT 74319
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCAA 25062
|| ||||| ||| | ||| | ||| | ||||| | || | |||||| ||
Sbjct 74318 ATTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGGTAAA 74268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418098246589280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |