Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 179 4e-40
seq3626 147 2e-30
seq4459 145 8e-30
seq4182 138 1e-27
>seq4146
Length=100757
Score = 179 bits (198), Expect = 4e-40
Identities = 344/502 (69%), Gaps = 4/502 (1%)
Strand=Plus/Plus
Query 20797 CCGACATTGGGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCA 20856
|||| || || || || || || || || || ||||||||||||||||| || |||||
Sbjct 16126 CCGAGGTTAGGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCG 16185
Query 20857 AAGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGATAAACGTTTGGCGCACGATC 20916
||||||||||| |||| || | |||| || || | | ||| | | | |
Sbjct 16186 AAGAATTTCCAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTTACC 16245
Query 20917 TTGTCGTGCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACACT 20976
|| || | | | | | ||||| || | ||||||||||| ||||| || || | ||
Sbjct 16246 TTATCATCAAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACC 16305
Query 20977 TTGAGATGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTACGGT 21036
|| | || || | || |||| | ||| ||||| ||||||||||||||||| |||
Sbjct 16306 TTCAAATCAGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGT 16365
Query 21037 TCGTTCCATGCGCTGACACCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGAATG 21096
|||||||| | | | ||| ||||| ||||| |||| || ||||| || || || ||
Sbjct 16366 TCGTTCCAGGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATA 16425
Query 21097 GCCACCTTAAAGTCGGCACGGCCCGC-GCACGAACGTTGCAACGCTTCGAAACTGCCCGG 21155
| || || ||||| | | |||||| ||| || | |||||| |||| |||||| ||
Sbjct 16426 GAAACTTTGAAGTCCTCTC-GCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTC 16484
Query 21156 GA-CACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTACA 21214
|| ||||| | | ||||| || || || || || || ||||| | || ||||| |
Sbjct 16485 GATTTCTTTTAAAC-TGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAA 16543
Query 21215 ACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACACAC 21274
| ||| | | || || |||| || ||||| || || || | | || || ||||
Sbjct 16544 GAAGATGTGTAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACAC 16603
Query 21275 CCCATTCGACAAAGTATGCTCC 21296
|||| || ||||| || |||||
Sbjct 16604 CCCACTCCACAAAATAAGCTCC 16625
>seq3626
Length=201135
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||||||| || || || ||||||| |||||| || ||||||||||| |||||
Sbjct 59291 CCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAG 59232
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| | ||||| |||||||| || || |||| || || ||||||||||||||
Sbjct 59231 AGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGG 59172
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| |||| | ||||| | ||| | ||| || | ||||| ||
Sbjct 59171 ATACCTTCTTTGTC-CTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTCAAC 59113
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | || || || || | || || |||||||| |||||
Sbjct 59112 CTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCAT 59065
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | ||| | ||||| || ||||||||||||||||| || ||
Sbjct 59519 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAA 59460
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | |||||| |||||||| |||||| | || || |||||||| || |||||
Sbjct 59459 AGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGG 59400
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||||||||| |||||| |||| | ||| | || || | ||||| ||
Sbjct 59399 ATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACT 59340
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | |||||| || || | ||||| || || ||||||||
Sbjct 59339 TCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCAT 59293
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | ||| | ||||| || ||||||||||||||||| || || |
Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | | ||||| || ||||| |||||| |||| || || || || || |||||
Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||| ||||| |||||| ||| | | || | |||||| | || || ||
Sbjct 59855 ATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59796
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| || || | || || || || || ||||||
Sbjct 59795 TCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCATA 59748
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||||| || | ||||| || ||||||||||||||||| || || |
Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | | ||||| | ||||| |||||| |||| || || || || || |||||
Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||| ||||| |||||| ||| | | || | |||||| | || || ||
Sbjct 59627 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59568
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| || || | || || || || || ||||||
Sbjct 59567 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCATA 59520
Score = 89.7 bits (98), Expect = 5e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 139534 ATGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC 139593
|| ||| ||||| | ||| || || ||||| | || || || |||||||||||||| ||
Sbjct 60207 ATTGCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTC 60148
Query 139594 GCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 139653
| || | | ||||| || || || |||||| |||| || || || || || ||
Sbjct 60147 AGAAAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGG 60088
Query 139654 AGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713
||| |||||||| ||||| |||||| ||| | | || | |||||| | || ||
Sbjct 60087 AGGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTC 60028
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||| || || | || || || || || ||||||
Sbjct 60027 AACTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCATA 59976
>seq4459
Length=154925
Score = 145 bits (160), Expect = 8e-30
Identities = 485/744 (65%), Gaps = 13/744 (2%)
Strand=Plus/Minus
Query 153072 TTGACAACTTGAAATTCGCCCGACAATACACGTCTCAAAAACAAATTACT-GTGAAACGG 153130
|| || |||||||||||||| || ||||| ||||| | | ||| ||||| ||
Sbjct 143661 TTAACGACTTGAAATTCGCCTGATAATACTCGTCTTTGGTATATATTTGAAGTGAAT-GG 143603
Query 153131 TTCAAACGACTCGTTGTTATTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCAC 153190
|||||| || || || || ||||| || || || | ||||| ||||| |||||
Sbjct 143602 TTCAAAGGATTCATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATAGGCGCCAG 143543
Query 153191 AAGCAACGAATTACGTAATCCGTGTTTTTGTATGTTCATCTTCAATTGTGACC-AGTCCC 153249
|||| |||||||| | ||| ||||| ||| || |||| || | ||| | ||||
Sbjct 143542 TAGCAGAGAATTACGAATTCCATGTTTAGCTATTTTT-TCTTTAAGAGCAACCCAATCCC 143484
Query 153250 ATAACGAAGTAGGTATCGCATTCCACAAATCGTATTGCAATATCCCTTGGCTAGCTTTGC 153309
| | ||| || || |||||||| ||| ||||||| |||||||||||| | |
Sbjct 143483 AGAGATCAGTGGGAGTCTTATTCCACATATCAAATTGCAAAATCCCTTGGCTAACAGGAC 143424
Query 153310 TACCGGCAAACGTGCTATACGGCTCACTGTCAGAC-GCCAGTTTCAAACTGGCATCGAGC 153368
|||| || | | ||||| ||| || | | || | || | || || || |
Sbjct 143423 TACCTTCATATGAACTATA-AACTCCCTCTTTCTCTGCTAATTCACAGCTAGCTTCCAAA 143365
Query 153369 GCGGCATGATACACAGTTTCGGAAATCTGTTTGTTCAGTAAAACGGCAGCATCGCTCACG 153428
|| | | ||| | ||| || | ||||||| ||| | || | || || || |
Sbjct 143364 GCTCCGTAATAGATAGTCTCAAATATCTGTTGGTTTAACAACAATGCTTTTTCACTTTCA 143305
Query 153429 TACGGTATGCGCAACATGACAAATGCATCGGCCAAACCTTGAATGCCAATGCCTATGGGA 153488
|| || ||||| || ||||| ||||| || |||||||| | ||||| ||||| ||
Sbjct 143304 TAAGGGTAGCGCATCAGCACAAAGGCATCAGCTAAACCTTGGACTCCAATACCTATTGGT 143245
Query 153489 CGATGGCGCATATTAGAtttttttGCAGCTTCAACAGGATAGAAATTGCGGTCGATAATT 153548
| ||| |||||||| || ||||| || || ||| ||||| ||||| || ||||||
Sbjct 143244 CTATGTCGCATATTGGAGTTTTTAGCTTCTGGAACTGGATAATAATTGACATCTATAATT 143185
Query 153549 TTATTTAAACTAATCACGACATG--TTTCACCACAGAATGCAACAGTTGAAAATCAAACG 153606
||||| || | | ||| ||| || | ||| | ||||| | |
Sbjct 143184 TTATT--AAGGTTTTGTGTTATGATTTTTGTAACTTCTTTTAACTTTCCAAAATTGTATG 143127
Query 153607 TTC---CATTAATGATATATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTT 153663
||| ||| | | | | | | || | ||||| || || || || || || || ||
Sbjct 143126 TTCTATCATCATTTACAAACATATTCAAAGCAATAGAAGCTAAATTACATACTGCTACTT 143067
Query 153664 CGTCGGGGGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGC 153723
| || | ||||| ||||||||| | ||| | ||| || ||||| || ||
Sbjct 143066 CATCTACTGATGTATATTCTACTATTTCTGTACATAGATTACTACATTTAATTGTTCCTA 143007
Query 153724 AATTACTTTGATTGCTTTTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGG 153783
||| | ||||| || || | |||||| | || ||||||| |||| |||| ||||| |
Sbjct 143006 GATTTTTCTGATTACTCTTTCTGTTACATGAATCTTTGTATAACATGAATGGAGTGCCTG 142947
Query 153784 TTTCGGCTTGAATTTCTATAATAG 153807
|||| |||| ||||| |||||
Sbjct 142946 TTTCAACTTGTGCTTCTACAATAG 142923
>seq4182
Length=188933
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| ||| | ||| || | || | ||||||||| || ||||| || || |||
Sbjct 74272 CCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGAT 74331
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| ||||| ||||||||||||||| |||||| |||||||||||| || ||
Sbjct 74332 AATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGA 74391
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| |||||||| || ||| |||| | ||||| | ||| | || |||| | ||||||
Sbjct 74392 ATACCTTCTTTATC-TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCAC 74450
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | || || || || | |||||||||||||| |||||
Sbjct 74451 CTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCAT 74498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495813741912800
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