Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4459 654 0.0 seq409 102 1e-16 >seq4459 Length=154925 Score = 654 bits (724), Expect = 0.0 Identities = 1220/1776 (69%), Gaps = 18/1776 (1%) Strand=Plus/Minus Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768 || || | ||| ||||| || | | | ||| ||||| ||||||| ||| ||||| || Sbjct 144009 TTATCTACTGTAAATTGGATTGCATTTGCTGCAGGTTTTGTACGTAAATAATACATGCCT 143950 Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828 ||||||| ||| | |||| | || ||||| || ||| ||||| |||| | || Sbjct 143949 GTTTTTAAACCCATTTTCCAAGCATAAAAATGTATGGACGTCAGTTTACCATAATTTGGT 143890 Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888 || |||| ||| ||||| | ||| |||||||| || || || || || || || |||||| Sbjct 143889 TCAGCTACATGAATATTAAAAGACTGACTTTGGTCTATAAATGCACCTCTATCAGCAGCC 143830 Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 78947 || | || | || || | ||||||||| | || ||||| || || || | |||| Sbjct 143829 ATCTGAATAGTAGTTTTCACAGAAATTTCCCATACTGTCTTATACAAATCTCTGA-TATC 143771 Query 78948 TTCTGGAAG-GTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 79004 || |||| |||| ||||||||| || ||| || | ||| ||| || || Sbjct 143770 TTTGGGAATAGTTTCAATATTCTGAACTGAACCATTATTATGAAGAATAAGATTTTTCAT 143711 Query 79005 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 79064 || || | |||||| | | | || ||| |||| | ||||| ||||||| ||||| Sbjct 143710 GTCATCGTCCCATAAATCTGCTTGAGTCAAATCTCTTAAAAGATGATGATTAACGACTTG 143651 Query 79065 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTC 79124 |||||| || || ||||||| | ||| ||||| || ||||||| | ||||| Sbjct 143650 AAATTCGCCTGATAATACTCGTCTTTGGTATATATTTGAAGTGAATGGTTCAAAGGATTC 143591 Query 79125 ATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATT 79184 |||||| || | || ||||| || ||||||||||||||||| |||| | | | ||| Sbjct 143590 ATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATAGGCGCCAGTAGCAGAGAATT 143531 Query 79185 TCTAAGACCGTATG-ATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243 | || || | | | || ||||| ||||| |||| |||||||||| ||||||| | Sbjct 143530 ACGAATTCCATGTTTAGCT-ATTTTTTCTTTAAGAGCAACCCAATCCCAGAGATCAGTGG 143472 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGC-GTATGATCCTGTGTAT 79302 | |||||| | |||| |||| | ||| || | ||| | | | | ||| ||| Sbjct 143471 GAGTCTTATTCCACATATCAAATTGCAAAATCCCTTGGCTAACAGGACTA-CCTTCATAT 143413 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 | |||| ||| || || || ||||||||||| || || || || ||||||||||| Sbjct 143412 GAACTATAAACTCCCTCTTTCTCTGCTAATTCACAGCTAGCTTCCAAAGCTCCGTAATAG 143353 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || || || || |||| | || | ||||| | || ||| | || || Sbjct 143352 ATAGTCTCAAATATCTGTTGGTTTAACAACAATGCTTTTTCACTTTCATAAGGGTAGCGC 143293 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 | || | ||| || || ||||| ||||| || |||||||| || |||||||||| | || Sbjct 143292 ATCAGCACAAAGGCATCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTCGCATA 143233 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 || || ||| ||||||||||| ||||||||||| | ||||||||||||||| || || Sbjct 143232 TTGGAGTTTTTAGCTTCTGGAACTGGATAATAATTGACATCTATAATTTTATTAAGGTTT 143173 Query 79543 CTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC---CATCTATT 79599 ||| | ||| || || |||| || ||||| || || |||| || Sbjct 143172 TGTGTTATGATTTTTGTAACTTCTTTTAACTTTCCAAAATTGTATGTTCTATCATCATTT 143113 Query 79600 ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 79659 |||||||| ||||| || | ||| || | |||||| || ||||| |||| | | | Sbjct 143112 ACAAACATATTCAAAGCAATAGAAGCTAAATTACATACTGCTACTTCATCTACTGATGTA 143053 Query 79660 TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTA 79719 |||| || |||||| || || || |||||||| ||||| ||||||| ||||| |||||| Sbjct 143052 TATTCTACTATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTTCTGATTA 142993 Query 79720 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGAT 79779 |||||| ||||||| | ||| || || | ||||| ||||| || ||||||| || | | Sbjct 142992 CTCTTTCTGTTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAACTTGTGCT 142933 Query 79780 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA--TAGACTTGTATCTCTTTTCTC 79837 |||| ||| || ||||| | ||| | ||| ||| | | ||| |||| ||||| Sbjct 142932 TCTACAATAGCCTTCCATAAAACTTGTGCCCTTACTTGTTTGACAA--ATCTTTTTTCAT 142875 Query 79838 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897 | || || | | ||| | ||| ||||| ||||||||| ||| | || ||||||| Sbjct 142874 TCTCATACTTTTCATACAGAGCTTCAAACTCTTCTCCCCAACAATCTGCCAAACCAGGAC 142815 Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGAT 79957 | || | ||||||||||| ||| | | ||| | | |||| ||||||||| | || Sbjct 142814 AGTCATGGGGACACATCAAACTCCAATTTTCATTTTTTTCAACTCTTTTCATAAACAAAT 142755 Query 79958 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 80017 | || ||||| | ||| ||| | || || | || | || || || || ||||||| Sbjct 142754 CTGGTATCCATAAAGCATAAAACAATTCCCTAGCTCGAACTTCTTCTTTGCCAGTATTCT 142695 Query 80018 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 80077 |||| ||||| | ||| | | | ||| |||||||| ||||| || |||| || | Sbjct 142694 TTTTCAGATCTAAAAACTCAAACACATCTGAATGCCATGGTTCTAAATATACAGCAAATG 142635 Query 80078 CTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 80137 | || || || ||||| || || ||||||| ||||| || ||| | ||||| ||||| | Sbjct 142634 CCCCTGGACGCTTGTTACCACCTTGATCTACATATCTGGCTGTGCTGTTATATACTCTTA 142575 Query 80138 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 80197 ||||||| | || ||||| ||| |||||| || || | ||| | | || | || | Sbjct 142574 ACATTGGGACAAGTCCATTTGATACACCATTTGTGCCAGCTATACATGTACCTTTAGCTC 142515 Query 80198 GAATATTACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 80256 ||| || ||| || || || || ||||| |||||| || || || ||| || Sbjct 142514 TGATACAGTGAACATGA-AGCCCAATGCCACCTGCAGATTTAGATATCAAGGCACATTGT 142456 Query 80257 TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 || | || ||||| || ||||| || || ||||| ||||| | || ||||| Sbjct 142455 TTCAGAGTGTCATATATTCCCTCAATACTGTCATCTTTCATGGCCAATAAGAAACAAGAT 142396 Query 80317 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 80376 |||| ||| | | ||| | ||| |||||| |||||| ||||| || || | Sbjct 142395 GACAATTGAGGTCTTGGAGTAGCAGCAGAAAATAAAGTAGGACTGGCGTGAGTGAAATAC 142336 Query 80377 TTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCT 80436 || ||||||| || || || || | ||||||||| || || || | ||| ||||| Sbjct 142335 TTCTCAGACAATAAGTTATAGGTGTTAATAGCTGAATCAATGTCTTCTCCATGTATTCCA 142276 Query 80437 ACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 | || |||||||||| ||| || || ||||| ||| Sbjct 142275 ATAGCTACACGCATTAGCATATGTTGTGGTCTCTCA 142240 >seq409 Length=488447 Score = 102 bits (112), Expect = 1e-16 Identities = 133/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || |||||||| || | |||||| || || ||||| || || || || Sbjct 75215 CCAGGCATGAGTCCACGCTTCTTTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAA 75274 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGT--CATGTA 50137 || || ||||| || ||||| || | || | |||||| | |||| | | | || | Sbjct 75275 ATACCCTCTACAGCTGCAAATGCTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCA 75334 Query 50138 -TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||| | | | ||||| || ||||||||||| |||||||||| |||||||| |||||| Sbjct 75335 ATCCATTGTAGTGCCCAGTCCGCCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTA 75394 Query 50197 AA 50198 || Sbjct 75395 AA 75396 Score = 93.3 bits (102), Expect = 6e-14 Identities = 88/111 (79%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 ||| || || |||| |||| ||| |||||||| || |||||||| || || || || ||| Sbjct 76494 TCAATGTTACCTTT-GATAAATCCACTTCTTCAACAGTCCAAAAGGAAGCTTCGGCTTTT 76552 Query 50494 TTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 50544 || ||||| | ||| || || |||| ||||| ||||| |||||||||||| Sbjct 76553 TTGTACATTTCCCAAATATCTGGATACTGGATAGGGAATATAACAAATCTA 76603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717906442368760