Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq409 125 7e-24
>seq409
Length=488447
Score = 125 bits (138), Expect = 7e-24
Identities = 164/225 (73%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951
|||||||||| ||||| || || ||||| || || || ||||| | ||| || ||
Sbjct 75177 CCTCATCTCTTGATATAAGCTCATTACTGAAA--GTCAAGCCAGGCATGAGTCCACGCTT 75234
Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011
||||||||||| || | |||||| || || || || || ||||| || || |||||
Sbjct 75235 CTTTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAA 75294
Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071
||||| | ||||||||||||| || ||||| | | ||||||| | ||||| ||
Sbjct 75295 TGCTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCAATCCATTGTAGTGCCCAGTC 75354
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| || ||||||| | || || ||||| ||||||||||||||
Sbjct 75355 CGCCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAA 75399
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 14141 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14200
||||||||| ||||| | || |||||||||||||| | |||||||||||||| ||
Sbjct 76209 AATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTTG 76268
Query 14201 AAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAA 14260
|| ||||| ||| |||| || || | ||| || || |||| | || | |
Sbjct 76269 GAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTAG 76328
Query 14261 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14320
||||||||| || || |||||| || ||||||||||| | | || ||| || || |
Sbjct 76329 ATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTTATGAAATG 76388
Query 14321 TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361
| ||| || || | ||| |||||| | ||||||||
Sbjct 76389 TCTCTCACAATCCTTTAAACTTTCCCAATCCGGTAAATCCT 76429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479485983220600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |