Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq409 125 7e-24 >seq409 Length=488447 Score = 125 bits (138), Expect = 7e-24 Identities = 164/225 (73%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 |||||||||| ||||| || || ||||| || || || ||||| | ||| || || Sbjct 75177 CCTCATCTCTTGATATAAGCTCATTACTGAAA--GTCAAGCCAGGCATGAGTCCACGCTT 75234 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||||||||||| || | |||||| || || || || || ||||| || || ||||| Sbjct 75235 CTTTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAA 75294 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 ||||| | ||||||||||||| || ||||| | | ||||||| | ||||| || Sbjct 75295 TGCTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCAATCCATTGTAGTGCCCAGTC 75354 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | || ||||||| | || || ||||| |||||||||||||| Sbjct 75355 CGCCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAA 75399 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 14141 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14200 ||||||||| ||||| | || |||||||||||||| | |||||||||||||| || Sbjct 76209 AATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTTG 76268 Query 14201 AAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAA 14260 || ||||| ||| |||| || || | ||| || || |||| | || | | Sbjct 76269 GAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTAG 76328 Query 14261 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14320 ||||||||| || || |||||| || ||||||||||| | | || ||| || || | Sbjct 76329 ATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTTATGAAATG 76388 Query 14321 TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 | ||| || || | ||| |||||| | |||||||| Sbjct 76389 TCTCTCACAATCCTTTAAACTTTCCCAATCCGGTAAATCCT 76429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479485983220600