Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq409 116 4e-21
>seq409
Length=488447
Score = 116 bits (128), Expect = 4e-21
Identities = 162/225 (72%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739
|||||||||| ||||| || || ||||| || || || ||||| | ||| || ||
Sbjct 75177 CCTCATCTCTTGATATAAGCTCATTACTGAAA--GTCAAGCCAGGCATGAGTCCACGCTT 75234
Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799
||||||||||| || | ||| || || || || || || ||||| || || |||||
Sbjct 75235 CTTTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAA 75294
Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859
||||| | ||||||||||||| || ||||| ||| ||||||| | ||||| ||
Sbjct 75295 TGCTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCAATCCATTGTAGTGCCCAGTC 75354
Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| || ||||||| | || || ||||| || ||||| |||||
Sbjct 75355 CGCCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAA 75399
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988
||||||||| ||||| | || |||||||||||||| | ||||| |||||||| ||
Sbjct 76209 AATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTTG 76268
Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAA 14048
|| ||||| || |||| || || | ||| ||||| |||| | || | |
Sbjct 76269 GAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTAG 76328
Query 14049 GTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14108
|||||||| ||||| |||||| || ||||||||||| | | || ||| || || |
Sbjct 76329 ATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTTATGAAATG 76388
Query 14109 TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149
| ||| || || | ||| |||||| | ||||||||
Sbjct 76389 TCTCTCACAATCCTTTAAACTTTCCCAATCCGGTAAATCCT 76429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478347357932760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |