Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq3626 82.4 6e-11 >seq3626 Length=201135 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||| ||| ||||| | ||||| || |||| || || | || ||||||||||| || Sbjct 59718 AGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCTTCCAATTGTTTTCC 59659 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTT 43031 ||||| || | ||||||||| || | || | ||||| || || ||| |||| Sbjct 59658 AGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCTTT 59599 Query 43032 GACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGT 43091 ||| | ||| |||||| || || || || | || || || ||||| || ||||| Sbjct 59598 GACATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATGGTCTTTCCAGTAAGAGT 59539 Query 43092 TTTCACAAAAATTTGCAT 43109 || ||||| || ||||| Sbjct 59538 CTTAACAAAGATCTGCAT 59521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381182013708822