Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2370 111 2e-19
seq409 102 1e-16
seq4459 100 4e-16
>seq2370
Length=330158
Score = 111 bits (122), Expect = 2e-19
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 70190 ACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAA 70249
|| ||||||| ||||| || || |||| || | ||||| || || ||||| | ||
Sbjct 265319 ACAAATCCAAATGATAGAAGAATGATAATTTGTGCGTGGAACCCAGCGGATTTAAAAAAA 265260
Query 70250 ATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACG--ATGGCAAATTGT 70307
||||| || || || || |||||| | | ||||| || ||| |||| || | |
Sbjct 265259 ATGGCTCTGCCTCCATGCCACTGTCTCGTGCAGTTCTAT--GTAGCTAATGGTGAACTAT 265202
Query 70308 CATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAA 70367
| || ||||| ||||| |||||||| ||||| | || |||||||| ||||| || |
Sbjct 265201 CGTGTAACATGTACCAGAGAAGTGCCGATTTGGGCTTGGGAGTACCCTTCAACATAGCCA 265142
Query 70368 GCTATTCTATGTTGACGCACATGATTGCTCACATTAC 70404
||||||| | || || ||||||||||| ||||| ||
Sbjct 265141 GCTATTCGCTTTTAACCCACATGATTGCACACATAAC 265105
>seq409
Length=488447
Score = 102 bits (112), Expect = 1e-16
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
||||| || || |||||||| || || || || || |||||||| | ||||||||| |
Sbjct 75297 GCATTTGCAGCTGTAGAGGGTATTTTTTTCTCAGGCAGTTTTGCTTCTATCTTTTGGTTA 75238
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
|||||||| ||||||||||| || |||| |||||| ||| ||||||| |||| |||
Sbjct 75237 AAGAAGCGTGGACTCATGCCTGGCTTGACTTTCAGTAATGAGCTTATATCAAGAGATGAG 75178
Query 125553 G 125553
|
Sbjct 75177 G 75177
>seq4459
Length=154925
Score = 100 bits (110), Expect = 4e-16
Identities = 206/301 (68%), Gaps = 8/301 (3%)
Strand=Plus/Plus
Query 96824 TGGCCTAGTGCCAATGCTCAGAATGTACAAT-GCAATGTCACGATACGTTACACAGGGCG 96882
||| || || |||||| | ||| | || || ||| | || |||| || || || |
Sbjct 142558 TGGACTTGTCCCAATGTTAAGAGTATATAACAGCACAGCCA-GATATGTAGATCAAGGTG 142616
Query 96883 GCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTG 96942
| || || || ||||| || | || || || || ||||| ||||| | || || ||||
Sbjct 142617 GTAACAAGCGTCCAGGGGCATTTGCTGTATATTTAGAACCATGGCATTCAGATGTGTTTG 142676
Query 96943 ACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTT 97002
| ||| | || || || || ||||| ||||| | ||||| ||||| |||||||
Sbjct 142677 AGTTTTTAGATCTGAAAAAGAATACTGGCAAAGAAGAAGTTCGAGCTAGGGAATTGTTTT 142736
Query 97003 ATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCC 97062
|||| | ||| | ||||||||||| ||||| | || | | || | |||||
Sbjct 142737 ATGCTTTATGGATACCAGATTTGTTTATGAAAAGAGTTGAAAAAAATGAAAATTGGAGTT 142796
Query 97063 TAATGTGCCCC---GACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGG 97119
| ||||| ||| |||| || || ||| || | ||||| ||||| ||||||||||| |
Sbjct 142797 TGATGTGTCCCCATGACT-GT--CCTGGTTTGGCAGATTGTTGGGGAGAAGAGTTTGAAG 142853
Query 97120 C 97120
|
Sbjct 142854 C 142854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740685344896840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |