Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2370 111 2e-19 seq409 102 1e-16 seq4459 100 4e-16 >seq2370 Length=330158 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 70190 ACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAA 70249 || ||||||| ||||| || || |||| || | ||||| || || ||||| | || Sbjct 265319 ACAAATCCAAATGATAGAAGAATGATAATTTGTGCGTGGAACCCAGCGGATTTAAAAAAA 265260 Query 70250 ATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACG--ATGGCAAATTGT 70307 ||||| || || || || |||||| | | ||||| || ||| |||| || | | Sbjct 265259 ATGGCTCTGCCTCCATGCCACTGTCTCGTGCAGTTCTAT--GTAGCTAATGGTGAACTAT 265202 Query 70308 CATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAA 70367 | || ||||| ||||| |||||||| ||||| | || |||||||| ||||| || | Sbjct 265201 CGTGTAACATGTACCAGAGAAGTGCCGATTTGGGCTTGGGAGTACCCTTCAACATAGCCA 265142 Query 70368 GCTATTCTATGTTGACGCACATGATTGCTCACATTAC 70404 ||||||| | || || ||||||||||| ||||| || Sbjct 265141 GCTATTCGCTTTTAACCCACATGATTGCACACATAAC 265105 >seq409 Length=488447 Score = 102 bits (112), Expect = 1e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 ||||| || || |||||||| || || || || || |||||||| | ||||||||| | Sbjct 75297 GCATTTGCAGCTGTAGAGGGTATTTTTTTCTCAGGCAGTTTTGCTTCTATCTTTTGGTTA 75238 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| ||||||||||| || |||| |||||| ||| ||||||| |||| ||| Sbjct 75237 AAGAAGCGTGGACTCATGCCTGGCTTGACTTTCAGTAATGAGCTTATATCAAGAGATGAG 75178 Query 125553 G 125553 | Sbjct 75177 G 75177 >seq4459 Length=154925 Score = 100 bits (110), Expect = 4e-16 Identities = 206/301 (68%), Gaps = 8/301 (3%) Strand=Plus/Plus Query 96824 TGGCCTAGTGCCAATGCTCAGAATGTACAAT-GCAATGTCACGATACGTTACACAGGGCG 96882 ||| || || |||||| | ||| | || || ||| | || |||| || || || | Sbjct 142558 TGGACTTGTCCCAATGTTAAGAGTATATAACAGCACAGCCA-GATATGTAGATCAAGGTG 142616 Query 96883 GCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTG 96942 | || || || ||||| || | || || || || ||||| ||||| | || || |||| Sbjct 142617 GTAACAAGCGTCCAGGGGCATTTGCTGTATATTTAGAACCATGGCATTCAGATGTGTTTG 142676 Query 96943 ACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTT 97002 | ||| | || || || || ||||| ||||| | ||||| ||||| ||||||| Sbjct 142677 AGTTTTTAGATCTGAAAAAGAATACTGGCAAAGAAGAAGTTCGAGCTAGGGAATTGTTTT 142736 Query 97003 ATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCC 97062 |||| | ||| | ||||||||||| ||||| | || | | || | ||||| Sbjct 142737 ATGCTTTATGGATACCAGATTTGTTTATGAAAAGAGTTGAAAAAAATGAAAATTGGAGTT 142796 Query 97063 TAATGTGCCCC---GACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGG 97119 | ||||| ||| |||| || || ||| || | ||||| ||||| ||||||||||| | Sbjct 142797 TGATGTGTCCCCATGACT-GT--CCTGGTTTGGCAGATTGTTGGGGAGAAGAGTTTGAAG 142853 Query 97120 C 97120 | Sbjct 142854 C 142854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740685344896840