Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq4182 122 6e-23
seq3626 91.5 9e-14
>seq4182
Length=188933
Score = 122 bits (134), Expect = 6e-23
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 33135 AATCTTCACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGT 33194
||| || ||| |||||||||| |||||| | ||| || || ||||| || || |||||||
Sbjct 74264 AATTTTTACCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGT 74323
Query 33195 AATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGT 33254
| || || || || | || |||| || || ||| ||| || ||||||||||| |
Sbjct 74324 AGTCGGATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGAT 74383
Query 33255 CCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
||| || || |||||||| || ||| |||||| ||| ||| || ||| |
Sbjct 74384 CCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAG 74443
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| || || || || || ||||| |||||||| ||||||||||| || |||||
Sbjct 74444 CCTCCACCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCAT 74498
>seq3626
Length=201135
Score = 91.5 bits (100), Expect = 9e-14
Identities = 141/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||||||||| || ||||| ||||| | | || ||| |||| || ||||||
Sbjct 59489 GTGGACTCTTTTTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCTTCCAGCTGTTTTCCA 59430
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289
||| || | ||||||||||||| || ||||||||||| || | | |||||
Sbjct 59429 GCAAAAATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCTTGGATTTTCGCC--- 59373
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
||||| ||| || || || || | || || | || ||||| || || || |||
Sbjct 59372 TTTACGTTTTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATCGTCTTACCTGTGAGA 59313
Query 33350 GTTTTTACGAAAATTTGCAT 33369
||||| || |||||||||||
Sbjct 59312 GTTTTAACAAAAATTTGCAT 59293
Score = 84.2 bits (92), Expect = 1e-11
Identities = 142/204 (70%), Gaps = 14/204 (7%)
Strand=Plus/Minus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG----TCATCCAATTGCTT 33228
|| ||||||||||| || ||||| ||||||| | ||| | || |||||||| ||
Sbjct 59717 GTGGACTCTTTTTGAATGTTGTAGTCAGACA----GGGTTCGCCCATCTTCCAATTGTTT 59662
Query 33229 TCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGC 33285
|||| ||| || | || || ||||| | || |||||||| || || | | | ||
Sbjct 59661 TCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTGGC 59602
Query 33286 CTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGT 33345
||| || | | ||| ||||| |||| ||| |||| ||| || || ||||| ||
Sbjct 59601 ---TTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATGGTCTTTCCAGT 59545
Query 33346 AAGAGTTTTTACGAAAATTTGCAT 33369
|||||| || || || || |||||
Sbjct 59544 AAGAGTCTTAACAAAGATCTGCAT 59521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318620801168382
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |