Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 250 2e-61
seq2492 96.9 3e-15
seq3626 89.7 4e-13
seq4182 84.2 2e-11
seq688 82.4 6e-11
>seq4146
Length=100757
Score = 250 bits (276), Expect = 2e-61
Identities = 586/877 (67%), Gaps = 13/877 (1%)
Strand=Plus/Plus
Query 101102 ACGCCTGTCCAACCGCGGCCGTACATGGCAACGCCCACAATAATTTTGCGCGGGTCTACG 101161
|| || |||||||| || || ||||| || || || || ||||| || |||| ||
Sbjct 15754 ACTCCAGTCCAACCACGACCATACATCGCTACACCAACTATAATCTTCTTAGGGTTGACT 15813
Query 101162 CCCTGGTTCGTGAGCGATTTAACAGCGTAATCCGTGTTGTACAGCTCGTTTGGGTTCCAA 101221
|| ||| ||| |||||| | | || || |||| || ||||| |||||
Sbjct 15814 CCTTGGGCTAAGAGGTTTTTAACTCCAAAGTCAGTTGTGTAGGTTTCCTTTGGATTCCAT 15873
Query 101222 CTCGGCGCGTAGAGTGTAGTTTGATAGCCCAGATCGATGTTTGACCACGCGCCTTTGAAA 101281
|| ||||| | | ||||||| || ||| | ||||||||||| ||||| ||
Sbjct 15874 GCAGGTGCGTACAACGGTGTTTGATGTCCAAGAGTGTCATTTGACCACGCTCCTTTAAAG 15933
Query 101282 TCGTAGCTCATGAGAAATATTTTATCGAGGAACTTTTGCGCAAGATCGTATTTTACTACA 101341
||||| ||||| | || || | ||| | | | || || ||| | |||||
Sbjct 15934 TCGTAACTCATTAAGAAGATATGATCCATATATTGCTGAGCTTTCCTGTAGTCAACTACT 15993
Query 101342 GCAATTTTGTCGTGACCCGAACTAATTGCACTTGTTAATTCGTATGTTTTGCCCGTTT-- 101399
||||| || ||| | |||||| || ||| | ||| ||| | || || || |
Sbjct 15994 TGGATTTTATCCCAACCAGCACTAATAGCGGATGTCAGTTCATATTTCTTACCAGTCTCT 16053
Query 101400 GCAGTTGCAACTCGTCCAGCATTGCGCGCAATTCTTTCAGTAAAATGTTGTACGTGTCAG 101459
|| | | ||||||| ||||||| | || || ||||||| ||| | || |||| |
Sbjct 16054 GCGGAT--AACTCGTTCAGCATTTCACGTAACTCTTTCA-TAA---GCTGGACGTA--AA 16105
Query 101460 CGTCGCGTTC-TTTGTTGC--CGAGTGTTGGGTTGGCGCCTTTACCACCCGGAAACTCCC 101516
| || | || |||| | | |||| | || || || ||||| ||||| || |||||||
Sbjct 16106 CTTCACCGTCATTTGGTCCACCGAGGTTAGGATTAGCACCTTTTCCACCAGGGAACTCCC 16165
Query 101517 AATCGATGTCTACCCCGTCAAAAAATTTCCAAACCTGCAAAAATTCTTTGACAGAATCCA 101576
|||| ||||| || || || || ||||||||| || | || ||||| || || |||
Sbjct 16166 AATCAATGTCAACACCATCGAAGAATTTCCAAGTTTGGAGGAAGTCTTTCACTGATGCCA 16225
Query 101577 CAAACACACGCCGTTTTATCGCGTCGTGCATATAATAGAACGGGTCGGACAATGTCCAGC 101636
|||| | | ||||| | || | | | | ||||| || || | || ||||||||
Sbjct 16226 CAAAACGATCTCTTTTTACCTTATCATCAAAAAAGTAGAATGGATCTGCCAGTGTCCAGC 16285
Query 101637 CGCCGATGGACGGCAAAATTTTAAGGTGTGGATTGGCCAATTTGGCCGCCATTAGCTGAC 101696
| ||||| || || | || || | | || | || ||| | ||| || || |
Sbjct 16286 CTCCGATTGATGGAAGAACCTTCAAATCAGGTCTAGCTTGTTTCAAAGACATCAGTTGTC 16345
Query 101697 CAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGATACACCTTTCTGCGGTTTTTGTATTG 101756
|||||||||||||||| || |||||||| | || | ||| ||||| |||||||||| |
Sbjct 16346 CAAAGTTGCCTTTGTAAGGTTCGTTCCAGGAGGACAAACCCTTCTGTGGTTTTTGTAAAG 16405
Query 101757 CGGCCCAAGGATCGTGGATAGCAACTTTAAAATCTGAACGGCCCTGGCAAGAACGTTGCA 101816
| |||||||| || ||||||| |||||| || || || || |||||| | |||||
Sbjct 16406 CTGCCCAAGGGTCATGGATAGAAACTTTGAAGTCCTCTCGCCCGCTGCAAGATCTTTGCA 16465
Query 101817 ACGCTTCAAAACTACCGGGTATGGTTTTGAGGGCGTCGTTAAGGCCATCGCCGCCACAAA 101876
| |||| ||||| || || ||| | |||||||| || || |||||||| |
Sbjct 16466 AAGCTTGGAAACTTCCTTCGATTTCTTTTAAACTGTCGTTAATTCCGTCACCGCCACAGA 16525
Query 101877 TGGGTATGAACCCGTACAACAAATGTGAGAGGTTGGGCAGCGGCACTTTGTCCACCGGAA 101936
|||| || || ||||| | | ||||| || || || | || || || || || || |
Sbjct 16526 TGGGGATAAATCCGTAAAGAAGATGTGTAAGATTTGGAATGGGTACCTTATCTACTGGGA 16585
Query 101937 AGTTGCGACCATACACGCCCCATTCTACAAAATACGC 101973
| || | | || || ||||| || |||||||| ||
Sbjct 16586 ATTTTCTAGGGTAAACACCCCACTCCACAAAATAAGC 16622
>seq2492
Length=83244
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || |||| |||||||| ||||| ||||||||||| || ||||| ||
Sbjct 41230 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAG-- 41287
Query 20042 ATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| | || |||||| | || ||||| ||| | || |||||||| || || |
Sbjct 41288 AGAGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 41347
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | || |||||||| |||||| || || | ||| || || || ||
Sbjct 41348 GGATACCCTCTTTGTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAA 41407
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | |||||||||||||| ||||| || ||||||||||| |||||
Sbjct 41408 CTTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456
Score = 96.9 bits (106), Expect = 3e-15
Identities = 165/235 (70%), Gaps = 6/235 (3%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| |||| || |||| |||||||| ||||| ||||||||||| || ||||| | |
Sbjct 41684 TTCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGT--C 41741
Query 20040 CCATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC-GA 20096
| ||| | || |||||| | || || || ||| | ||||||||||| || || |
Sbjct 41742 AGAGAGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGG 41801
Query 20097 CGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTT 20156
|||| | || |||||||| ||||| || || | ||| || || |||||
Sbjct 41802 CGGG-ATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTT 41860
Query 20157 CCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
| || | |||||| ||||||||||| | || || |||||||| ||||| ||
Sbjct 41861 CTACCTCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTT 41915
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || |||| |||||||| ||||| ||||||||||| || ||||| | ||
Sbjct 40546 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGT--CCG 40603
Query 20042 ATAGTTTTAG--AATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| | | |||||| | || ||||| ||| | || |||||||| || || |
Sbjct 40604 AGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 40663
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | || |||||||| ||||| || || | ||| || || ||| ||
Sbjct 40664 GGATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAA 40723
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | || ||||||||||| ||||| || ||||| ||||| |||||
Sbjct 40724 CTTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || |||| |||||||| ||||| ||||||||||| || ||||| | |
Sbjct 41002 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGT--CTG 41059
Query 20042 ATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| | || |||||| | || ||||| ||| | || |||||||| || || |
Sbjct 41060 AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 41119
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | || |||||||| ||||| || || | ||| || || || ||
Sbjct 41120 GGATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAA 41179
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | || ||||||||||| ||||| || ||||| ||||| |||||
Sbjct 41180 CTTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228
>seq3626
Length=201135
Score = 89.7 bits (98), Expect = 4e-13
Identities = 162/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| |||||||| | || ||||| || || |||||||| ||||| |||||||||| |
Sbjct 59293 TTCCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAAT--C 59236
Query 20040 CCATAGTTTTAG--AATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGAC 20097
| ||| | | |||||| | ||||| || || | ||||| | ||| ||||||
Sbjct 59235 AGAGAGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGG 59176
Query 20098 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTC 20157
|| | ||||||||||| |||||| ||| || | ||| | ||| || ||
Sbjct 59175 AGGGATACCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTC 59116
Query 20158 CGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212
|||| ||| |||||||| || || | || || || || || |||||||||
Sbjct 59115 AACCTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCATTTTT 59061
>seq4182
Length=188933
Score = 84.2 bits (92), Expect = 2e-11
Identities = 162/237 (68%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 19978 TTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATC 20037
||| ||||||| |||||||||||| | ||||| ||||| || || || || ||||| ||
Sbjct 74268 TTTACCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTC 74327
Query 20038 GCCCATAGTTTTAG--AATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCG 20095
| ||| | | | |||||||| ||||| || ||| | || | | || |||||
Sbjct 74328 G--GATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCC 74385
Query 20096 ACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGT 20155
|| | |||||||| || |||||| ||| || | ||| || |||| ||
Sbjct 74386 GGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCC 74445
Query 20156 TCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212
||| || | ||| |||||||| || || | ||||| || || || |||||| ||
Sbjct 74446 TCCACCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCATTGTT 74502
>seq688
Length=109112
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/200 (70%), Gaps = 1/200 (1%)
Strand=Plus/Plus
Query 23554 CCTTT-ACGAGCCGCACGTATGTGCAGCGATCAAACCAACGTGCGTGTTCTTCCCACGGC 23612
||||| || || | ||||| | || ||||| ||||||||||| |||| ||||| ||
Sbjct 9396 CCTTTGACAAGTTGGACGTAGGCACATCGATCGAACCAACGTGCATGTTGCTCCCAGGGA 9455
Query 23613 TCGTCGGTGCTTTCCCAGTCTTTGAGGCCGCCGTCGCAATGAAAACATTTGACCCTGTCA 23672
||| |||||||||| || | || ||||| || ||| ||||| ||||
Sbjct 9456 ATATCGTCATTTTCCCAGTCCTTCAAACCACCGTCACAGAAAAAGCATTTCGTTTTGTCT 9515
Query 23673 CCCTTGCCGGTGTAATAAAAACCGGCTTCAGCTAATTGCTCTGGCTTTTGTTTTAAACTA 23732
|| | || ||||| | ||||| ||||| |||| | ||| ||||||||| | |||
Sbjct 9516 CCTTGACCAGTGTAGAAGAAACCAGCTTCGGCTAGCTCCTCAGGCTTTTGTCGCATACTG 9575
Query 23733 ACCGGCCAATCCACAAAAGT 23752
|||||||| ||||| ||
Sbjct 9576 CGAGGCCAATCGACAAATGT 9595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419380815414879
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |