Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 201 1e-46
seq3626 95.1 1e-14
>seq4146
Length=100757
Score = 201 bits (222), Expect = 1e-46
Identities = 478/714 (67%), Gaps = 9/714 (1%)
Strand=Plus/Minus
Query 30231 TTACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGACTTAGTTCCCGTCCC 30290
||| ||||| ||||||||||||||| ||| ||| |||| ||| || ||| | ||
Sbjct 16620 TTATTTTGTGGAGTGGGGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGTACCCATTCC 16561
Query 30291 CAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACGA 30350
|| ||||| |||||| | || || ||| | || |||| || || || || || |||||
Sbjct 16560 AAATCTTACACATCTTCTTTACGGATTTATCCCCATCTGTGGCGGTGACGGAATTAACGA 16501
Query 30351 TAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGC-GCGGGTCGAG 30409
|| ||||| || | || || | ||||| |||| ||||||| ||||| ||||
Sbjct 16500 CAGTTTAAAAGAAATCGAAGGAAGTTTCCAAGCTTTGCAAAGATCTTGCAGCGGG-CGAG 16442
Query 30410 AGGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAG 30469
|||| || ||||| | || || || ||||| ||| | ||||||||||| || ||
Sbjct 16441 AGGACTTCAAAGTTTCTATCCATGACCCTTGGGCAGCTTTACAAAAACCACAGAAGGGTT 16382
Query 30470 TGGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAAAGAC 30529
|| | | ||| |||| || || ||||| || ||||| ||||||||| | | ||| |
Sbjct 16381 TGTCCTCCTGGAACGAACCTTACAAAGGCAACTTTGGACAACTGATGTCTTTGAAACAAG 16322
Query 30530 ACAATCCCGACCTTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCCTTTCT 30589
| || || | | | || | || || || || || |||||||| || || ||||
Sbjct 16321 CTAGACCTGATTTGAAGGTTCTTCCATCAATCGGAGGCTGGACACTGGCAGATCCATTCT 16262
Query 30590 -TTAAATTGA-GTTCTGCCGAAAATCGCGCCGTTTTCGTTGAGTCCGCACGAGAGTATTT 30647
| |||| | | | |||| | |||||| || | || | ||| | |
Sbjct 16261 ACTTTTTTGATGATAAGGTAAAAAGAG-ATCGTTTT-GTGGCATCAGTGAAAGACTTCCT 16204
Query 30648 GCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGGTAAAGG 30707
| || |||||||| || || || | ||||| || |||||||| || || || |||||
Sbjct 16203 CCAAACTTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGGAAAAGG 16144
Query 30708 TGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGCAGTTATTGAA 30767
||||||||| | | || | || ||| || || | | || || ||| | ||||
Sbjct 16143 TGCTAATCCTAACCTCGGTGGACC---AAATGACGGTGAAGTTTACGTCCAGCTTATGAA 16087
Query 30768 AGAGCTCAGAGAAATGCTAAACGATCTTTCTAAAGAAACAGGGAAAAAATACCAGCTCAC 30827
|||| | | |||||||| ||||| | || ||| || || || ||||| | || ||
Sbjct 16086 AGAGTTACGTGAAATGCTGAACGAGTTATCCGCAGAGACTGGTAAGAAATATGAACTGAC 16027
Query 30828 CTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATAGTTAATTATGAAAATGCGCAAGA 30887
|| || ||||| || || | ||||||||| ||||| | || || || || |
Sbjct 16026 ATCCGCTATTAGTGCTGGTTGGGATAAAATCCAAGTAGTTGACTACAGGAAAGCTCAGCA 15967
Query 30888 GTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTGGTCTAA 30941
||| | ||||| || || | |||| ||||| |||||||| || ||||| ||
Sbjct 15966 ATATATGGATCATATCTTCTTAATGAGTTACGACTTTAAAGGAGCGTGGTCAAA 15913
>seq3626
Length=201135
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| || || || | ||| || || ||||| || ||||||||||||||||||||||
Sbjct 59291 CCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAG 59232
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| | ||| | || || ||||| || || || | || | ||||||||||| ||
Sbjct 59231 AGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGG 59172
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| || ||| |||||| |||||| || | | | || ||||| | | ||| |
Sbjct 59171 ATACCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTCAACC 59112
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||||||||||| || ||||| || ||||| || ||||||||
Sbjct 59111 TCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCAT 59065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421043996934359
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |