Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq8308 132 3e-26 seq437 129 3e-25 seq2960 122 5e-23 SEQ11472 120 2e-22 seq3936 120 2e-22 seq2248 120 2e-22 SEQ25738 116 2e-21 seq2812 116 2e-21 seq90 114 7e-21 >seq8308 Length=3555 Score = 132 bits (146), Expect = 3e-26 Identities = 89/100 (89%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| Sbjct 492 TTAATAAAAAATGAAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 433 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGAT 11538 |||||||||| | ||||||||||||||||||| ||| || Sbjct 432 ACGACGCTCTAATCAACTGAGCTAATGGGCCGATGACAAT 393 >seq437 Length=307787 Score = 129 bits (142), Expect = 3e-25 Identities = 85/95 (89%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 306038 AAAAAATGAAAATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 305979 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTCGACGAT 11538 ||||| ||||||||||||||||||||| ||| || Sbjct 305978 GCTCTAACCAACTGAGCTAATGGGCCGATGACAAT 305944 Score = 118 bits (130), Expect = 6e-22 Identities = 90/105 (86%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 11437 AATTA-ATAAAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 ||||| ||| ||| ||||| ||||||||| |||||||||| |||||||||||||| Sbjct 295094 AATTATATATGAAAAAAAATTCTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 295153 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGAT 11538 ||||||||||||||| ||||||||||||||||||||| ||| || Sbjct 295154 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGATGACAAT 295198 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 286312 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 286371 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 286372 TGAGCTAATGGGCCG 286386 >seq2960 Length=153699 Score = 122 bits (134), Expect = 5e-23 Identities = 75/81 (93%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 29260 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 29201 Query 11515 CTGAGCTAATGGGCCGTCGAC 11535 ||||||||||||||||| ||| Sbjct 29200 CTGAGCTAATGGGCCGTTGAC 29180 >SEQ11472 Length=38219 Score = 120 bits (132), Expect = 2e-22 Identities = 79/87 (91%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 17069 AAAAAGTCA--TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 17126 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 17127 GCTCTAACCAACTGAGCTAATGGGCCG 17153 >seq3936 Length=143839 Score = 120 bits (132), Expect = 2e-22 Identities = 73/78 (94%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 108693 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 108752 Query 11515 CTGAGCTAATGGGCCGTC 11532 |||||||||||||||||| Sbjct 108753 CTGAGCTAATGGGCCGTC 108770 >seq2248 Length=223377 Score = 120 bits (132), Expect = 2e-22 Identities = 79/88 (90%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 76739 TAAAAAATAAGCGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 76680 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 76679 CGCTCTAACCAACTGAGCTAATGGGCCG 76652 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| || Sbjct 111030 AAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 110971 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 110970 CAACTGAGCTAATGGGCC 110953 >SEQ25738 Length=624 Score = 116 bits (128), Expect = 2e-21 Identities = 81/92 (88%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 63 AAAAAGTCAG--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 120 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTCGAC 11535 ||||| |||||||||||||||||||| | ||| Sbjct 121 GCTCTAACCAACTGAGCTAATGGGCCATTGAC 152 >seq2812 Length=131900 Score = 116 bits (128), Expect = 2e-21 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 53922 AAAAATAACTGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 53981 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 53982 CTCTAACCAACTGAGCTAATGGGCCG 54007 >seq90 Length=373225 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 19223 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 19282 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 19283 TGAGCTAATGGGCCG 19297 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261362578934284